Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7648 | 23167;23168;23169 | chr2:178721077;178721076;178721075 | chr2:179585804;179585803;179585802 |
N2AB | 7331 | 22216;22217;22218 | chr2:178721077;178721076;178721075 | chr2:179585804;179585803;179585802 |
N2A | 6404 | 19435;19436;19437 | chr2:178721077;178721076;178721075 | chr2:179585804;179585803;179585802 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | rs397517502 | -0.001 | 0.079 | N | 0.207 | 0.237 | 0.314417295294 | gnomAD-2.1.1 | 2.86E-05 | None | None | None | None | N | None | 4.14E-05 | 2.83E-05 | None | 0 | 0 | None | 6.54E-05 | None | 0 | 3.13E-05 | 0 |
E/K | rs397517502 | -0.001 | 0.079 | N | 0.207 | 0.237 | 0.314417295294 | gnomAD-3.1.2 | 3.29E-05 | None | None | None | None | N | None | 4.83E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 4.41E-05 | 0 | 0 |
E/K | rs397517502 | -0.001 | 0.079 | N | 0.207 | 0.237 | 0.314417295294 | 1000 genomes | 1.99681E-04 | None | None | None | None | N | None | 8E-04 | 0 | None | None | 0 | 0 | None | None | None | 0 | None |
E/K | rs397517502 | -0.001 | 0.079 | N | 0.207 | 0.237 | 0.314417295294 | gnomAD-4.0.0 | 1.48778E-05 | None | None | None | None | N | None | 6.66649E-05 | 1.66694E-05 | None | 0 | 0 | None | 0 | 0 | 1.27196E-05 | 2.19732E-05 | 1.60149E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1244 | likely_benign | 0.151 | benign | -0.819 | Destabilizing | 0.002 | N | 0.256 | neutral | D | 0.526517574 | None | None | N |
E/C | 0.8395 | likely_pathogenic | 0.8811 | pathogenic | -0.427 | Destabilizing | 0.985 | D | 0.513 | neutral | None | None | None | None | N |
E/D | 0.295 | likely_benign | 0.341 | ambiguous | -0.622 | Destabilizing | None | N | 0.219 | neutral | N | 0.489656029 | None | None | N |
E/F | 0.7081 | likely_pathogenic | 0.783 | pathogenic | -0.213 | Destabilizing | 0.915 | D | 0.484 | neutral | None | None | None | None | N |
E/G | 0.2311 | likely_benign | 0.3047 | benign | -1.113 | Destabilizing | 0.506 | D | 0.373 | neutral | N | 0.505041714 | None | None | N |
E/H | 0.4501 | ambiguous | 0.5281 | ambiguous | -0.045 | Destabilizing | 0.989 | D | 0.389 | neutral | None | None | None | None | N |
E/I | 0.2423 | likely_benign | 0.2854 | benign | -0.033 | Destabilizing | 0.554 | D | 0.434 | neutral | None | None | None | None | N |
E/K | 0.0875 | likely_benign | 0.1059 | benign | -0.153 | Destabilizing | 0.079 | N | 0.207 | neutral | N | 0.485073596 | None | None | N |
E/L | 0.2596 | likely_benign | 0.2999 | benign | -0.033 | Destabilizing | 0.261 | N | 0.402 | neutral | None | None | None | None | N |
E/M | 0.3339 | likely_benign | 0.3784 | ambiguous | 0.171 | Stabilizing | 0.772 | D | 0.465 | neutral | None | None | None | None | N |
E/N | 0.399 | ambiguous | 0.4844 | ambiguous | -0.731 | Destabilizing | 0.535 | D | 0.366 | neutral | None | None | None | None | N |
E/P | 0.2955 | likely_benign | 0.3595 | ambiguous | -0.275 | Destabilizing | 0.427 | N | 0.411 | neutral | None | None | None | None | N |
E/Q | 0.1042 | likely_benign | 0.1185 | benign | -0.631 | Destabilizing | 0.879 | D | 0.403 | neutral | D | 0.532539469 | None | None | N |
E/R | 0.1665 | likely_benign | 0.2099 | benign | 0.257 | Stabilizing | 0.726 | D | 0.367 | neutral | None | None | None | None | N |
E/S | 0.257 | likely_benign | 0.3201 | benign | -0.95 | Destabilizing | 0.289 | N | 0.323 | neutral | None | None | None | None | N |
E/T | 0.2419 | likely_benign | 0.3024 | benign | -0.698 | Destabilizing | 0.529 | D | 0.381 | neutral | None | None | None | None | N |
E/V | 0.1409 | likely_benign | 0.1652 | benign | -0.275 | Destabilizing | 0.003 | N | 0.253 | neutral | D | 0.536638567 | None | None | N |
E/W | 0.9042 | likely_pathogenic | 0.9403 | pathogenic | 0.125 | Stabilizing | 0.997 | D | 0.595 | neutral | None | None | None | None | N |
E/Y | 0.6343 | likely_pathogenic | 0.7152 | pathogenic | 0.066 | Stabilizing | 0.989 | D | 0.477 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.