Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7658 | 23197;23198;23199 | chr2:178721047;178721046;178721045 | chr2:179585774;179585773;179585772 |
N2AB | 7341 | 22246;22247;22248 | chr2:178721047;178721046;178721045 | chr2:179585774;179585773;179585772 |
N2A | 6414 | 19465;19466;19467 | chr2:178721047;178721046;178721045 | chr2:179585774;179585773;179585772 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/L | None | None | 0.016 | N | 0.319 | 0.306 | 0.55355060856 | gnomAD-4.0.0 | 1.36886E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79954E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0879 | likely_benign | 0.0859 | benign | -0.387 | Destabilizing | 0.001 | N | 0.13 | neutral | N | 0.50975861 | None | None | N |
S/C | 0.2036 | likely_benign | 0.1817 | benign | -0.285 | Destabilizing | 0.994 | D | 0.393 | neutral | None | None | None | None | N |
S/D | 0.3172 | likely_benign | 0.3924 | ambiguous | 0.28 | Stabilizing | 0.486 | N | 0.347 | neutral | None | None | None | None | N |
S/E | 0.4062 | ambiguous | 0.4967 | ambiguous | 0.251 | Stabilizing | 0.726 | D | 0.319 | neutral | None | None | None | None | N |
S/F | 0.1867 | likely_benign | 0.2066 | benign | -0.692 | Destabilizing | 0.961 | D | 0.499 | neutral | None | None | None | None | N |
S/G | 0.1374 | likely_benign | 0.146 | benign | -0.596 | Destabilizing | 0.591 | D | 0.351 | neutral | None | None | None | None | N |
S/H | 0.2464 | likely_benign | 0.291 | benign | -1.025 | Destabilizing | 0.995 | D | 0.399 | neutral | None | None | None | None | N |
S/I | 0.1832 | likely_benign | 0.2068 | benign | 0.046 | Stabilizing | 0.78 | D | 0.456 | neutral | None | None | None | None | N |
S/K | 0.4608 | ambiguous | 0.5862 | pathogenic | -0.464 | Destabilizing | 0.876 | D | 0.319 | neutral | None | None | None | None | N |
S/L | 0.1244 | likely_benign | 0.1283 | benign | 0.046 | Stabilizing | 0.016 | N | 0.319 | neutral | N | 0.510452043 | None | None | N |
S/M | 0.2085 | likely_benign | 0.2177 | benign | 0.09 | Stabilizing | 0.961 | D | 0.407 | neutral | None | None | None | None | N |
S/N | 0.1357 | likely_benign | 0.1563 | benign | -0.323 | Destabilizing | 0.003 | N | 0.225 | neutral | None | None | None | None | N |
S/P | 0.8763 | likely_pathogenic | 0.9295 | pathogenic | -0.064 | Destabilizing | 0.91 | D | 0.383 | neutral | N | 0.504445829 | None | None | N |
S/Q | 0.3824 | ambiguous | 0.4334 | ambiguous | -0.433 | Destabilizing | 0.98 | D | 0.387 | neutral | None | None | None | None | N |
S/R | 0.3848 | ambiguous | 0.4892 | ambiguous | -0.364 | Destabilizing | 0.961 | D | 0.383 | neutral | None | None | None | None | N |
S/T | 0.0755 | likely_benign | 0.0827 | benign | -0.363 | Destabilizing | 0.001 | N | 0.099 | neutral | N | 0.452787819 | None | None | N |
S/V | 0.1821 | likely_benign | 0.1889 | benign | -0.064 | Destabilizing | 0.57 | D | 0.445 | neutral | None | None | None | None | N |
S/W | 0.3242 | likely_benign | 0.3743 | ambiguous | -0.73 | Destabilizing | 0.998 | D | 0.597 | neutral | None | None | None | None | N |
S/Y | 0.158 | likely_benign | 0.1799 | benign | -0.433 | Destabilizing | 0.994 | D | 0.504 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.