Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7659 | 23200;23201;23202 | chr2:178721044;178721043;178721042 | chr2:179585771;179585770;179585769 |
N2AB | 7342 | 22249;22250;22251 | chr2:178721044;178721043;178721042 | chr2:179585771;179585770;179585769 |
N2A | 6415 | 19468;19469;19470 | chr2:178721044;178721043;178721042 | chr2:179585771;179585770;179585769 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/L | None | None | 0.871 | N | 0.542 | 0.248 | 0.416956310301 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/A | 0.9387 | likely_pathogenic | 0.9315 | pathogenic | -1.926 | Destabilizing | 0.995 | D | 0.72 | prob.delet. | None | None | None | None | N |
F/C | 0.845 | likely_pathogenic | 0.812 | pathogenic | -1.156 | Destabilizing | 1.0 | D | 0.808 | deleterious | N | 0.512622129 | None | None | N |
F/D | 0.9768 | likely_pathogenic | 0.9749 | pathogenic | -0.04 | Destabilizing | 1.0 | D | 0.81 | deleterious | None | None | None | None | N |
F/E | 0.9782 | likely_pathogenic | 0.9765 | pathogenic | 0.064 | Stabilizing | 0.999 | D | 0.811 | deleterious | None | None | None | None | N |
F/G | 0.9738 | likely_pathogenic | 0.9726 | pathogenic | -2.264 | Highly Destabilizing | 1.0 | D | 0.793 | deleterious | None | None | None | None | N |
F/H | 0.8836 | likely_pathogenic | 0.8933 | pathogenic | -0.58 | Destabilizing | 1.0 | D | 0.759 | deleterious | None | None | None | None | N |
F/I | 0.5542 | ambiguous | 0.5667 | pathogenic | -0.925 | Destabilizing | 0.503 | D | 0.367 | neutral | D | 0.53113396 | None | None | N |
F/K | 0.9777 | likely_pathogenic | 0.9797 | pathogenic | -0.996 | Destabilizing | 0.999 | D | 0.81 | deleterious | None | None | None | None | N |
F/L | 0.9406 | likely_pathogenic | 0.9437 | pathogenic | -0.925 | Destabilizing | 0.871 | D | 0.542 | neutral | N | 0.493519721 | None | None | N |
F/M | 0.7862 | likely_pathogenic | 0.7844 | pathogenic | -0.794 | Destabilizing | 0.966 | D | 0.753 | deleterious | None | None | None | None | N |
F/N | 0.9334 | likely_pathogenic | 0.9244 | pathogenic | -1.044 | Destabilizing | 1.0 | D | 0.816 | deleterious | None | None | None | None | N |
F/P | 0.9978 | likely_pathogenic | 0.9983 | pathogenic | -1.25 | Destabilizing | 1.0 | D | 0.809 | deleterious | None | None | None | None | N |
F/Q | 0.9605 | likely_pathogenic | 0.9597 | pathogenic | -1.029 | Destabilizing | 1.0 | D | 0.809 | deleterious | None | None | None | None | N |
F/R | 0.9478 | likely_pathogenic | 0.9508 | pathogenic | -0.493 | Destabilizing | 0.999 | D | 0.814 | deleterious | None | None | None | None | N |
F/S | 0.8843 | likely_pathogenic | 0.8705 | pathogenic | -1.953 | Destabilizing | 0.999 | D | 0.783 | deleterious | N | 0.516164507 | None | None | N |
F/T | 0.9096 | likely_pathogenic | 0.9029 | pathogenic | -1.753 | Destabilizing | 0.999 | D | 0.76 | deleterious | None | None | None | None | N |
F/V | 0.5349 | ambiguous | 0.5333 | ambiguous | -1.25 | Destabilizing | 0.922 | D | 0.655 | neutral | N | 0.520242176 | None | None | N |
F/W | 0.7498 | likely_pathogenic | 0.7953 | pathogenic | -0.032 | Destabilizing | 1.0 | D | 0.727 | prob.delet. | None | None | None | None | N |
F/Y | 0.3822 | ambiguous | 0.3997 | ambiguous | -0.266 | Destabilizing | 0.989 | D | 0.63 | neutral | N | 0.510507971 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.