Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7662 | 23209;23210;23211 | chr2:178721035;178721034;178721033 | chr2:179585762;179585761;179585760 |
N2AB | 7345 | 22258;22259;22260 | chr2:178721035;178721034;178721033 | chr2:179585762;179585761;179585760 |
N2A | 6418 | 19477;19478;19479 | chr2:178721035;178721034;178721033 | chr2:179585762;179585761;179585760 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | None | None | 0.498 | N | 0.507 | 0.269 | 0.328222422547 | gnomAD-4.0.0 | 1.59238E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.4334E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.1079 | likely_benign | 0.1046 | benign | -0.544 | Destabilizing | 0.498 | N | 0.507 | neutral | N | 0.481387142 | None | None | N |
S/C | 0.2628 | likely_benign | 0.2497 | benign | -0.319 | Destabilizing | 0.191 | N | 0.394 | neutral | N | 0.511687531 | None | None | N |
S/D | 0.4238 | ambiguous | 0.553 | ambiguous | 0.454 | Stabilizing | 0.956 | D | 0.567 | neutral | None | None | None | None | N |
S/E | 0.6463 | likely_pathogenic | 0.7311 | pathogenic | 0.46 | Stabilizing | 0.984 | D | 0.569 | neutral | None | None | None | None | N |
S/F | 0.3684 | ambiguous | 0.4121 | ambiguous | -0.78 | Destabilizing | 1.0 | D | 0.755 | deleterious | N | 0.490607535 | None | None | N |
S/G | 0.0857 | likely_benign | 0.1094 | benign | -0.788 | Destabilizing | 0.988 | D | 0.538 | neutral | None | None | None | None | N |
S/H | 0.4281 | ambiguous | 0.5073 | ambiguous | -1.184 | Destabilizing | 1.0 | D | 0.673 | neutral | None | None | None | None | N |
S/I | 0.5434 | ambiguous | 0.5887 | pathogenic | -0.009 | Destabilizing | 0.999 | D | 0.757 | deleterious | None | None | None | None | N |
S/K | 0.7796 | likely_pathogenic | 0.8495 | pathogenic | -0.299 | Destabilizing | 0.994 | D | 0.573 | neutral | None | None | None | None | N |
S/L | 0.1675 | likely_benign | 0.1618 | benign | -0.009 | Destabilizing | 0.994 | D | 0.685 | prob.neutral | None | None | None | None | N |
S/M | 0.3027 | likely_benign | 0.312 | benign | 0.02 | Stabilizing | 1.0 | D | 0.673 | neutral | None | None | None | None | N |
S/N | 0.1568 | likely_benign | 0.2369 | benign | -0.294 | Destabilizing | 0.063 | N | 0.282 | neutral | None | None | None | None | N |
S/P | 0.7589 | likely_pathogenic | 0.8065 | pathogenic | -0.153 | Destabilizing | 0.999 | D | 0.691 | prob.neutral | N | 0.499824247 | None | None | N |
S/Q | 0.5891 | likely_pathogenic | 0.6518 | pathogenic | -0.346 | Destabilizing | 0.999 | D | 0.635 | neutral | None | None | None | None | N |
S/R | 0.7149 | likely_pathogenic | 0.7935 | pathogenic | -0.31 | Destabilizing | 0.999 | D | 0.691 | prob.neutral | None | None | None | None | N |
S/T | 0.1328 | likely_benign | 0.1478 | benign | -0.343 | Destabilizing | 0.792 | D | 0.566 | neutral | N | 0.507315738 | None | None | N |
S/V | 0.4645 | ambiguous | 0.4779 | ambiguous | -0.153 | Destabilizing | 0.995 | D | 0.689 | prob.neutral | None | None | None | None | N |
S/W | 0.4764 | ambiguous | 0.552 | ambiguous | -0.792 | Destabilizing | 1.0 | D | 0.764 | deleterious | None | None | None | None | N |
S/Y | 0.2498 | likely_benign | 0.2984 | benign | -0.478 | Destabilizing | 1.0 | D | 0.75 | deleterious | D | 0.523997344 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.