Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7666 | 23221;23222;23223 | chr2:178721023;178721022;178721021 | chr2:179585750;179585749;179585748 |
N2AB | 7349 | 22270;22271;22272 | chr2:178721023;178721022;178721021 | chr2:179585750;179585749;179585748 |
N2A | 6422 | 19489;19490;19491 | chr2:178721023;178721022;178721021 | chr2:179585750;179585749;179585748 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/F | None | None | 1.0 | D | 0.803 | 0.523 | 0.758381520966 | gnomAD-4.0.0 | 1.36886E-06 | None | None | None | None | N | None | 5.97943E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
L/V | rs2078276460 | None | 0.989 | D | 0.65 | 0.515 | 0.721660892059 | gnomAD-4.0.0 | 6.84431E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.51991E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.9582 | likely_pathogenic | 0.9607 | pathogenic | -2.715 | Highly Destabilizing | 1.0 | D | 0.754 | deleterious | None | None | None | None | N |
L/C | 0.9465 | likely_pathogenic | 0.9423 | pathogenic | -2.023 | Highly Destabilizing | 1.0 | D | 0.847 | deleterious | None | None | None | None | N |
L/D | 0.9997 | likely_pathogenic | 0.9998 | pathogenic | -3.611 | Highly Destabilizing | 1.0 | D | 0.904 | deleterious | None | None | None | None | N |
L/E | 0.9974 | likely_pathogenic | 0.9983 | pathogenic | -3.292 | Highly Destabilizing | 1.0 | D | 0.89 | deleterious | None | None | None | None | N |
L/F | 0.6107 | likely_pathogenic | 0.6612 | pathogenic | -1.712 | Destabilizing | 1.0 | D | 0.803 | deleterious | D | 0.533713169 | None | None | N |
L/G | 0.9937 | likely_pathogenic | 0.9949 | pathogenic | -3.317 | Highly Destabilizing | 1.0 | D | 0.877 | deleterious | None | None | None | None | N |
L/H | 0.9912 | likely_pathogenic | 0.9938 | pathogenic | -3.073 | Highly Destabilizing | 1.0 | D | 0.879 | deleterious | D | 0.5833059 | None | None | N |
L/I | 0.2208 | likely_benign | 0.2565 | benign | -0.902 | Destabilizing | 0.985 | D | 0.64 | neutral | N | 0.5203554 | None | None | N |
L/K | 0.995 | likely_pathogenic | 0.9968 | pathogenic | -2.222 | Highly Destabilizing | 1.0 | D | 0.888 | deleterious | None | None | None | None | N |
L/M | 0.3942 | ambiguous | 0.3958 | ambiguous | -1.03 | Destabilizing | 0.999 | D | 0.783 | deleterious | None | None | None | None | N |
L/N | 0.9976 | likely_pathogenic | 0.9983 | pathogenic | -2.955 | Highly Destabilizing | 1.0 | D | 0.905 | deleterious | None | None | None | None | N |
L/P | 0.9976 | likely_pathogenic | 0.9987 | pathogenic | -1.498 | Destabilizing | 1.0 | D | 0.905 | deleterious | D | 0.5833059 | None | None | N |
L/Q | 0.985 | likely_pathogenic | 0.9887 | pathogenic | -2.61 | Highly Destabilizing | 1.0 | D | 0.907 | deleterious | None | None | None | None | N |
L/R | 0.9874 | likely_pathogenic | 0.9917 | pathogenic | -2.267 | Highly Destabilizing | 1.0 | D | 0.902 | deleterious | D | 0.5833059 | None | None | N |
L/S | 0.9958 | likely_pathogenic | 0.9967 | pathogenic | -3.489 | Highly Destabilizing | 1.0 | D | 0.885 | deleterious | None | None | None | None | N |
L/T | 0.986 | likely_pathogenic | 0.9892 | pathogenic | -3.004 | Highly Destabilizing | 1.0 | D | 0.835 | deleterious | None | None | None | None | N |
L/V | 0.3215 | likely_benign | 0.3515 | ambiguous | -1.498 | Destabilizing | 0.989 | D | 0.65 | neutral | D | 0.532156233 | None | None | N |
L/W | 0.9659 | likely_pathogenic | 0.9749 | pathogenic | -2.172 | Highly Destabilizing | 1.0 | D | 0.855 | deleterious | None | None | None | None | N |
L/Y | 0.9717 | likely_pathogenic | 0.9782 | pathogenic | -1.923 | Destabilizing | 0.998 | D | 0.856 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.