Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7670 | 23233;23234;23235 | chr2:178721011;178721010;178721009 | chr2:179585738;179585737;179585736 |
N2AB | 7353 | 22282;22283;22284 | chr2:178721011;178721010;178721009 | chr2:179585738;179585737;179585736 |
N2A | 6426 | 19501;19502;19503 | chr2:178721011;178721010;178721009 | chr2:179585738;179585737;179585736 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | None | None | 0.425 | N | 0.226 | 0.104 | 0.134241683229 | gnomAD-4.0.0 | 6.84451E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99789E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1421 | likely_benign | 0.1556 | benign | -0.568 | Destabilizing | 0.139 | N | 0.186 | neutral | N | 0.413015057 | None | None | N |
E/C | 0.7746 | likely_pathogenic | 0.8619 | pathogenic | -0.015 | Destabilizing | 0.007 | N | 0.219 | neutral | None | None | None | None | N |
E/D | 0.082 | likely_benign | 0.085 | benign | -0.37 | Destabilizing | 0.001 | N | 0.112 | neutral | N | 0.38005449 | None | None | N |
E/F | 0.669 | likely_pathogenic | 0.748 | pathogenic | -0.363 | Destabilizing | 0.981 | D | 0.367 | neutral | None | None | None | None | N |
E/G | 0.1129 | likely_benign | 0.1234 | benign | -0.781 | Destabilizing | 0.001 | N | 0.114 | neutral | N | 0.402259346 | None | None | N |
E/H | 0.2946 | likely_benign | 0.3631 | ambiguous | -0.26 | Destabilizing | 0.944 | D | 0.208 | neutral | None | None | None | None | N |
E/I | 0.443 | ambiguous | 0.5213 | ambiguous | -0.029 | Destabilizing | 0.828 | D | 0.401 | neutral | None | None | None | None | N |
E/K | 0.099 | likely_benign | 0.117 | benign | 0.392 | Stabilizing | 0.425 | N | 0.226 | neutral | N | 0.396370736 | None | None | N |
E/L | 0.405 | ambiguous | 0.4683 | ambiguous | -0.029 | Destabilizing | 0.704 | D | 0.379 | neutral | None | None | None | None | N |
E/M | 0.4304 | ambiguous | 0.4968 | ambiguous | 0.222 | Stabilizing | 0.981 | D | 0.302 | neutral | None | None | None | None | N |
E/N | 0.1481 | likely_benign | 0.175 | benign | -0.075 | Destabilizing | 0.003 | N | 0.167 | neutral | None | None | None | None | N |
E/P | 0.7508 | likely_pathogenic | 0.8266 | pathogenic | -0.189 | Destabilizing | 0.828 | D | 0.363 | neutral | None | None | None | None | N |
E/Q | 0.1121 | likely_benign | 0.1239 | benign | -0.007 | Destabilizing | 0.784 | D | 0.271 | neutral | N | 0.400259191 | None | None | N |
E/R | 0.1686 | likely_benign | 0.2043 | benign | 0.51 | Stabilizing | 0.704 | D | 0.217 | neutral | None | None | None | None | N |
E/S | 0.1527 | likely_benign | 0.1763 | benign | -0.209 | Destabilizing | 0.013 | N | 0.103 | neutral | None | None | None | None | N |
E/T | 0.2063 | likely_benign | 0.2428 | benign | -0.015 | Destabilizing | 0.329 | N | 0.278 | neutral | None | None | None | None | N |
E/V | 0.2712 | likely_benign | 0.3168 | benign | -0.189 | Destabilizing | 0.642 | D | 0.349 | neutral | N | 0.473140796 | None | None | N |
E/W | 0.8184 | likely_pathogenic | 0.8797 | pathogenic | -0.148 | Destabilizing | 0.995 | D | 0.314 | neutral | None | None | None | None | N |
E/Y | 0.4693 | ambiguous | 0.5521 | ambiguous | -0.1 | Destabilizing | 0.981 | D | 0.327 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.