Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7672 | 23239;23240;23241 | chr2:178721005;178721004;178721003 | chr2:179585732;179585731;179585730 |
N2AB | 7355 | 22288;22289;22290 | chr2:178721005;178721004;178721003 | chr2:179585732;179585731;179585730 |
N2A | 6428 | 19507;19508;19509 | chr2:178721005;178721004;178721003 | chr2:179585732;179585731;179585730 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/C | rs1470201253 | None | 0.998 | D | 0.449 | 0.293 | 0.375861065471 | gnomAD-3.1.2 | 2.63E-05 | None | None | None | None | N | None | 0 | 2.61986E-04 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
S/C | rs1470201253 | None | 0.998 | D | 0.449 | 0.293 | 0.375861065471 | gnomAD-4.0.0 | 2.62829E-05 | None | None | None | None | N | None | 0 | 2.61986E-04 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
S/N | None | None | None | N | 0.212 | 0.193 | 0.132336055621 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0877 | likely_benign | 0.0866 | benign | -0.533 | Destabilizing | 0.014 | N | 0.297 | neutral | None | None | None | None | N |
S/C | 0.139 | likely_benign | 0.144 | benign | -0.393 | Destabilizing | 0.998 | D | 0.449 | neutral | D | 0.528115084 | None | None | N |
S/D | 0.2071 | likely_benign | 0.2374 | benign | -0.663 | Destabilizing | 0.001 | N | 0.124 | neutral | None | None | None | None | N |
S/E | 0.342 | ambiguous | 0.4032 | ambiguous | -0.734 | Destabilizing | 0.006 | N | 0.152 | neutral | None | None | None | None | N |
S/F | 0.23 | likely_benign | 0.243 | benign | -1.08 | Destabilizing | 0.996 | D | 0.445 | neutral | None | None | None | None | N |
S/G | 0.0755 | likely_benign | 0.0742 | benign | -0.677 | Destabilizing | 0.001 | N | 0.161 | neutral | N | 0.483073441 | None | None | N |
S/H | 0.2436 | likely_benign | 0.2638 | benign | -1.266 | Destabilizing | 0.053 | N | 0.27 | neutral | None | None | None | None | N |
S/I | 0.1591 | likely_benign | 0.1529 | benign | -0.272 | Destabilizing | 0.989 | D | 0.456 | neutral | D | 0.522650549 | None | None | N |
S/K | 0.3549 | ambiguous | 0.411 | ambiguous | -0.654 | Destabilizing | 0.975 | D | 0.32 | neutral | None | None | None | None | N |
S/L | 0.118 | likely_benign | 0.1147 | benign | -0.272 | Destabilizing | 0.943 | D | 0.437 | neutral | None | None | None | None | N |
S/M | 0.1996 | likely_benign | 0.1981 | benign | 0.239 | Stabilizing | 0.999 | D | 0.452 | neutral | None | None | None | None | N |
S/N | 0.0992 | likely_benign | 0.0998 | benign | -0.532 | Destabilizing | None | N | 0.212 | neutral | N | 0.508873176 | None | None | N |
S/P | 0.626 | likely_pathogenic | 0.678 | pathogenic | -0.33 | Destabilizing | 0.62 | D | 0.463 | neutral | None | None | None | None | N |
S/Q | 0.331 | likely_benign | 0.3729 | ambiguous | -0.895 | Destabilizing | 0.751 | D | 0.395 | neutral | None | None | None | None | N |
S/R | 0.2792 | likely_benign | 0.3227 | benign | -0.358 | Destabilizing | 0.986 | D | 0.466 | neutral | N | 0.472048371 | None | None | N |
S/T | 0.0738 | likely_benign | 0.0763 | benign | -0.56 | Destabilizing | None | N | 0.199 | neutral | N | 0.441090746 | None | None | N |
S/V | 0.1654 | likely_benign | 0.1629 | benign | -0.33 | Destabilizing | 0.86 | D | 0.433 | neutral | None | None | None | None | N |
S/W | 0.3666 | ambiguous | 0.405 | ambiguous | -1.051 | Destabilizing | 1.0 | D | 0.476 | neutral | None | None | None | None | N |
S/Y | 0.2162 | likely_benign | 0.2383 | benign | -0.772 | Destabilizing | 0.964 | D | 0.449 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.