Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7674 | 23245;23246;23247 | chr2:178720999;178720998;178720997 | chr2:179585726;179585725;179585724 |
N2AB | 7357 | 22294;22295;22296 | chr2:178720999;178720998;178720997 | chr2:179585726;179585725;179585724 |
N2A | 6430 | 19513;19514;19515 | chr2:178720999;178720998;178720997 | chr2:179585726;179585725;179585724 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | None | None | 0.789 | N | 0.418 | 0.15 | 0.297375071883 | gnomAD-4.0.0 | 1.59359E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43423E-05 | 0 |
E/D | rs865791908 | None | 0.002 | N | 0.169 | 0.065 | 0.0846915920261 | gnomAD-4.0.0 | 1.59352E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 2.41313E-03 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1155 | likely_benign | 0.1408 | benign | -0.065 | Destabilizing | 0.789 | D | 0.418 | neutral | N | 0.488630324 | None | None | N |
E/C | 0.8325 | likely_pathogenic | 0.904 | pathogenic | 0.222 | Stabilizing | 0.998 | D | 0.609 | neutral | None | None | None | None | N |
E/D | 0.094 | likely_benign | 0.095 | benign | -0.127 | Destabilizing | 0.002 | N | 0.169 | neutral | N | 0.46450267 | None | None | N |
E/F | 0.6621 | likely_pathogenic | 0.781 | pathogenic | -0.22 | Destabilizing | 0.995 | D | 0.537 | neutral | None | None | None | None | N |
E/G | 0.1232 | likely_benign | 0.158 | benign | -0.171 | Destabilizing | 0.962 | D | 0.42 | neutral | N | 0.45840482 | None | None | N |
E/H | 0.3944 | ambiguous | 0.524 | ambiguous | 0.126 | Stabilizing | 0.993 | D | 0.364 | neutral | None | None | None | None | N |
E/I | 0.3459 | ambiguous | 0.4393 | ambiguous | 0.154 | Stabilizing | 0.989 | D | 0.53 | neutral | None | None | None | None | N |
E/K | 0.1089 | likely_benign | 0.1534 | benign | 0.634 | Stabilizing | 0.038 | N | 0.135 | neutral | N | 0.508640236 | None | None | N |
E/L | 0.3401 | ambiguous | 0.4474 | ambiguous | 0.154 | Stabilizing | 0.968 | D | 0.448 | neutral | None | None | None | None | N |
E/M | 0.4043 | ambiguous | 0.504 | ambiguous | 0.21 | Stabilizing | 0.984 | D | 0.491 | neutral | None | None | None | None | N |
E/N | 0.1992 | likely_benign | 0.2523 | benign | 0.489 | Stabilizing | 0.667 | D | 0.409 | neutral | None | None | None | None | N |
E/P | 0.6769 | likely_pathogenic | 0.7874 | pathogenic | 0.099 | Stabilizing | 0.933 | D | 0.385 | neutral | None | None | None | None | N |
E/Q | 0.1352 | likely_benign | 0.1752 | benign | 0.49 | Stabilizing | 0.832 | D | 0.441 | neutral | N | 0.461380561 | None | None | N |
E/R | 0.1961 | likely_benign | 0.291 | benign | 0.661 | Stabilizing | 0.821 | D | 0.412 | neutral | None | None | None | None | N |
E/S | 0.1414 | likely_benign | 0.1771 | benign | 0.35 | Stabilizing | 0.832 | D | 0.4 | neutral | None | None | None | None | N |
E/T | 0.1807 | likely_benign | 0.2248 | benign | 0.444 | Stabilizing | 0.933 | D | 0.41 | neutral | None | None | None | None | N |
E/V | 0.2047 | likely_benign | 0.2598 | benign | 0.099 | Stabilizing | 0.943 | D | 0.399 | neutral | N | 0.478777254 | None | None | N |
E/W | 0.794 | likely_pathogenic | 0.8931 | pathogenic | -0.201 | Destabilizing | 1.0 | D | 0.652 | neutral | None | None | None | None | N |
E/Y | 0.5455 | ambiguous | 0.6827 | pathogenic | -0.003 | Destabilizing | 0.998 | D | 0.499 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.