Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7679 | 23260;23261;23262 | chr2:178720984;178720983;178720982 | chr2:179585711;179585710;179585709 |
N2AB | 7362 | 22309;22310;22311 | chr2:178720984;178720983;178720982 | chr2:179585711;179585710;179585709 |
N2A | 6435 | 19528;19529;19530 | chr2:178720984;178720983;178720982 | chr2:179585711;179585710;179585709 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/S | rs1052929607 | None | 1.0 | D | 0.908 | 0.825 | 0.884691997466 | gnomAD-4.0.0 | 6.00162E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 6.56252E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.9909 | likely_pathogenic | 0.9926 | pathogenic | -2.784 | Highly Destabilizing | 1.0 | D | 0.877 | deleterious | None | None | None | None | N |
Y/C | 0.8977 | likely_pathogenic | 0.9111 | pathogenic | -2.145 | Highly Destabilizing | 1.0 | D | 0.891 | deleterious | D | 0.665728122 | None | None | N |
Y/D | 0.9948 | likely_pathogenic | 0.9962 | pathogenic | -3.299 | Highly Destabilizing | 1.0 | D | 0.909 | deleterious | D | 0.665728122 | None | None | N |
Y/E | 0.9984 | likely_pathogenic | 0.9989 | pathogenic | -3.052 | Highly Destabilizing | 1.0 | D | 0.91 | deleterious | None | None | None | None | N |
Y/F | 0.1132 | likely_benign | 0.1333 | benign | -1.13 | Destabilizing | 0.999 | D | 0.691 | prob.neutral | D | 0.581554153 | None | None | N |
Y/G | 0.9895 | likely_pathogenic | 0.9901 | pathogenic | -3.247 | Highly Destabilizing | 1.0 | D | 0.909 | deleterious | None | None | None | None | N |
Y/H | 0.9591 | likely_pathogenic | 0.9709 | pathogenic | -2.41 | Highly Destabilizing | 1.0 | D | 0.809 | deleterious | D | 0.665526318 | None | None | N |
Y/I | 0.754 | likely_pathogenic | 0.8208 | pathogenic | -1.24 | Destabilizing | 0.999 | D | 0.865 | deleterious | None | None | None | None | N |
Y/K | 0.9983 | likely_pathogenic | 0.9988 | pathogenic | -2.265 | Highly Destabilizing | 1.0 | D | 0.909 | deleterious | None | None | None | None | N |
Y/L | 0.7265 | likely_pathogenic | 0.76 | pathogenic | -1.24 | Destabilizing | 0.997 | D | 0.796 | deleterious | None | None | None | None | N |
Y/M | 0.9337 | likely_pathogenic | 0.9485 | pathogenic | -1.313 | Destabilizing | 1.0 | D | 0.861 | deleterious | None | None | None | None | N |
Y/N | 0.974 | likely_pathogenic | 0.9799 | pathogenic | -3.189 | Highly Destabilizing | 1.0 | D | 0.907 | deleterious | D | 0.665728122 | None | None | N |
Y/P | 0.9989 | likely_pathogenic | 0.9991 | pathogenic | -1.772 | Destabilizing | 1.0 | D | 0.924 | deleterious | None | None | None | None | N |
Y/Q | 0.9979 | likely_pathogenic | 0.9986 | pathogenic | -2.771 | Highly Destabilizing | 1.0 | D | 0.865 | deleterious | None | None | None | None | N |
Y/R | 0.9937 | likely_pathogenic | 0.9954 | pathogenic | -2.368 | Highly Destabilizing | 1.0 | D | 0.909 | deleterious | None | None | None | None | N |
Y/S | 0.9792 | likely_pathogenic | 0.9836 | pathogenic | -3.548 | Highly Destabilizing | 1.0 | D | 0.908 | deleterious | D | 0.665728122 | None | None | N |
Y/T | 0.9868 | likely_pathogenic | 0.9904 | pathogenic | -3.152 | Highly Destabilizing | 1.0 | D | 0.909 | deleterious | None | None | None | None | N |
Y/V | 0.7316 | likely_pathogenic | 0.7917 | pathogenic | -1.772 | Destabilizing | 1.0 | D | 0.843 | deleterious | None | None | None | None | N |
Y/W | 0.7978 | likely_pathogenic | 0.8161 | pathogenic | -0.461 | Destabilizing | 1.0 | D | 0.8 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.