Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7683 | 23272;23273;23274 | chr2:178720972;178720971;178720970 | chr2:179585699;179585698;179585697 |
N2AB | 7366 | 22321;22322;22323 | chr2:178720972;178720971;178720970 | chr2:179585699;179585698;179585697 |
N2A | 6439 | 19540;19541;19542 | chr2:178720972;178720971;178720970 | chr2:179585699;179585698;179585697 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/P | rs2078270258 | None | 1.0 | D | 0.879 | 0.65 | 0.790187556284 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
A/P | rs2078270258 | None | 1.0 | D | 0.879 | 0.65 | 0.790187556284 | gnomAD-4.0.0 | 6.57142E-06 | None | None | None | None | N | None | 2.41243E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
A/S | None | None | 0.995 | D | 0.629 | 0.515 | 0.648076967581 | gnomAD-4.0.0 | 1.60929E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.78738E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.9279 | likely_pathogenic | 0.9292 | pathogenic | -1.708 | Destabilizing | 1.0 | D | 0.835 | deleterious | None | None | None | None | N |
A/D | 0.9959 | likely_pathogenic | 0.9963 | pathogenic | -3.0 | Highly Destabilizing | 1.0 | D | 0.867 | deleterious | D | 0.651073184 | None | None | N |
A/E | 0.9913 | likely_pathogenic | 0.9913 | pathogenic | -2.835 | Highly Destabilizing | 1.0 | D | 0.842 | deleterious | None | None | None | None | N |
A/F | 0.9413 | likely_pathogenic | 0.9475 | pathogenic | -0.794 | Destabilizing | 0.999 | D | 0.884 | deleterious | None | None | None | None | N |
A/G | 0.4002 | ambiguous | 0.473 | ambiguous | -1.766 | Destabilizing | 0.904 | D | 0.623 | neutral | D | 0.582413167 | None | None | N |
A/H | 0.9971 | likely_pathogenic | 0.997 | pathogenic | -1.966 | Destabilizing | 1.0 | D | 0.871 | deleterious | None | None | None | None | N |
A/I | 0.632 | likely_pathogenic | 0.6824 | pathogenic | -0.208 | Destabilizing | 0.997 | D | 0.756 | deleterious | None | None | None | None | N |
A/K | 0.9982 | likely_pathogenic | 0.9981 | pathogenic | -1.479 | Destabilizing | 1.0 | D | 0.848 | deleterious | None | None | None | None | N |
A/L | 0.6824 | likely_pathogenic | 0.712 | pathogenic | -0.208 | Destabilizing | 0.992 | D | 0.694 | prob.neutral | None | None | None | None | N |
A/M | 0.8333 | likely_pathogenic | 0.8432 | pathogenic | -0.568 | Destabilizing | 1.0 | D | 0.883 | deleterious | None | None | None | None | N |
A/N | 0.9891 | likely_pathogenic | 0.9904 | pathogenic | -1.821 | Destabilizing | 1.0 | D | 0.871 | deleterious | None | None | None | None | N |
A/P | 0.9925 | likely_pathogenic | 0.9941 | pathogenic | -0.546 | Destabilizing | 1.0 | D | 0.879 | deleterious | D | 0.634852018 | None | None | N |
A/Q | 0.9891 | likely_pathogenic | 0.9887 | pathogenic | -1.694 | Destabilizing | 1.0 | D | 0.873 | deleterious | None | None | None | None | N |
A/R | 0.9933 | likely_pathogenic | 0.9924 | pathogenic | -1.433 | Destabilizing | 1.0 | D | 0.872 | deleterious | None | None | None | None | N |
A/S | 0.4998 | ambiguous | 0.5359 | ambiguous | -2.155 | Highly Destabilizing | 0.995 | D | 0.629 | neutral | D | 0.594980419 | None | None | N |
A/T | 0.5808 | likely_pathogenic | 0.641 | pathogenic | -1.885 | Destabilizing | 0.999 | D | 0.697 | prob.neutral | D | 0.608708494 | None | None | N |
A/V | 0.298 | likely_benign | 0.3477 | ambiguous | -0.546 | Destabilizing | 0.553 | D | 0.4 | neutral | D | 0.527640656 | None | None | N |
A/W | 0.998 | likely_pathogenic | 0.9976 | pathogenic | -1.513 | Destabilizing | 1.0 | D | 0.852 | deleterious | None | None | None | None | N |
A/Y | 0.9894 | likely_pathogenic | 0.9893 | pathogenic | -1.069 | Destabilizing | 1.0 | D | 0.89 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.