Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7684 | 23275;23276;23277 | chr2:178720969;178720968;178720967 | chr2:179585696;179585695;179585694 |
N2AB | 7367 | 22324;22325;22326 | chr2:178720969;178720968;178720967 | chr2:179585696;179585695;179585694 |
N2A | 6440 | 19543;19544;19545 | chr2:178720969;178720968;178720967 | chr2:179585696;179585695;179585694 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/Y | rs759120198 | 0.887 | 0.643 | N | 0.379 | 0.24 | 0.364926071151 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
H/Y | rs759120198 | 0.887 | 0.643 | N | 0.379 | 0.24 | 0.364926071151 | gnomAD-4.0.0 | 2.06281E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.04311E-07 | 2.32775E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/A | 0.2411 | likely_benign | 0.3453 | ambiguous | -0.398 | Destabilizing | 0.466 | N | 0.491 | neutral | None | None | None | None | N |
H/C | 0.1602 | likely_benign | 0.196 | benign | 0.344 | Stabilizing | 0.981 | D | 0.471 | neutral | None | None | None | None | N |
H/D | 0.2352 | likely_benign | 0.321 | benign | -0.174 | Destabilizing | 0.324 | N | 0.443 | neutral | N | 0.458521713 | None | None | N |
H/E | 0.2009 | likely_benign | 0.2815 | benign | -0.124 | Destabilizing | 0.153 | N | 0.303 | neutral | None | None | None | None | N |
H/F | 0.2654 | likely_benign | 0.3602 | ambiguous | 0.266 | Stabilizing | 0.805 | D | 0.48 | neutral | None | None | None | None | N |
H/G | 0.2731 | likely_benign | 0.3838 | ambiguous | -0.717 | Destabilizing | 0.466 | N | 0.459 | neutral | None | None | None | None | N |
H/I | 0.2307 | likely_benign | 0.3267 | benign | 0.448 | Stabilizing | 0.296 | N | 0.549 | neutral | None | None | None | None | N |
H/K | 0.1412 | likely_benign | 0.1893 | benign | -0.309 | Destabilizing | 0.148 | N | 0.444 | neutral | None | None | None | None | N |
H/L | 0.1305 | likely_benign | 0.1723 | benign | 0.448 | Stabilizing | 0.001 | N | 0.303 | neutral | N | 0.488361831 | None | None | N |
H/M | 0.3983 | ambiguous | 0.5158 | ambiguous | 0.379 | Stabilizing | 0.747 | D | 0.481 | neutral | None | None | None | None | N |
H/N | 0.119 | likely_benign | 0.1396 | benign | -0.137 | Destabilizing | 0.324 | N | 0.263 | neutral | N | 0.458521713 | None | None | N |
H/P | 0.7283 | likely_pathogenic | 0.7887 | pathogenic | 0.19 | Stabilizing | 0.493 | N | 0.505 | neutral | N | 0.516319223 | None | None | N |
H/Q | 0.0962 | likely_benign | 0.1248 | benign | 0.002 | Stabilizing | 0.004 | N | 0.107 | neutral | N | 0.413557428 | None | None | N |
H/R | 0.0586 | likely_benign | 0.0672 | benign | -0.743 | Destabilizing | 0.001 | N | 0.094 | neutral | N | 0.419387322 | None | None | N |
H/S | 0.1751 | likely_benign | 0.2488 | benign | -0.175 | Destabilizing | 0.466 | N | 0.413 | neutral | None | None | None | None | N |
H/T | 0.1873 | likely_benign | 0.2776 | benign | -0.032 | Destabilizing | 0.388 | N | 0.453 | neutral | None | None | None | None | N |
H/V | 0.194 | likely_benign | 0.2709 | benign | 0.19 | Stabilizing | 0.305 | N | 0.479 | neutral | None | None | None | None | N |
H/W | 0.2808 | likely_benign | 0.3707 | ambiguous | 0.367 | Stabilizing | 0.996 | D | 0.468 | neutral | None | None | None | None | N |
H/Y | 0.1002 | likely_benign | 0.13 | benign | 0.668 | Stabilizing | 0.643 | D | 0.379 | neutral | N | 0.502581922 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.