Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7685 | 23278;23279;23280 | chr2:178720966;178720965;178720964 | chr2:179585693;179585692;179585691 |
N2AB | 7368 | 22327;22328;22329 | chr2:178720966;178720965;178720964 | chr2:179585693;179585692;179585691 |
N2A | 6441 | 19546;19547;19548 | chr2:178720966;178720965;178720964 | chr2:179585693;179585692;179585691 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/D | None | None | 0.996 | D | 0.601 | 0.596 | 0.492267288202 | gnomAD-4.0.0 | 1.37507E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.80841E-06 | 0 | 0 |
N/S | None | None | 0.996 | N | 0.567 | 0.502 | 0.366848117066 | gnomAD-4.0.0 | 1.60947E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43972E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.9642 | likely_pathogenic | 0.9683 | pathogenic | -0.637 | Destabilizing | 0.998 | D | 0.742 | deleterious | None | None | None | None | N |
N/C | 0.8939 | likely_pathogenic | 0.9069 | pathogenic | 0.062 | Stabilizing | 1.0 | D | 0.682 | prob.neutral | None | None | None | None | N |
N/D | 0.9398 | likely_pathogenic | 0.9453 | pathogenic | -1.157 | Destabilizing | 0.996 | D | 0.601 | neutral | D | 0.557690232 | None | None | N |
N/E | 0.9947 | likely_pathogenic | 0.9949 | pathogenic | -1.061 | Destabilizing | 0.999 | D | 0.693 | prob.neutral | None | None | None | None | N |
N/F | 0.997 | likely_pathogenic | 0.997 | pathogenic | -0.419 | Destabilizing | 1.0 | D | 0.737 | prob.delet. | None | None | None | None | N |
N/G | 0.9286 | likely_pathogenic | 0.9379 | pathogenic | -0.974 | Destabilizing | 1.0 | D | 0.542 | neutral | None | None | None | None | N |
N/H | 0.9012 | likely_pathogenic | 0.9109 | pathogenic | -0.884 | Destabilizing | 1.0 | D | 0.728 | prob.delet. | D | 0.547601374 | None | None | N |
N/I | 0.973 | likely_pathogenic | 0.977 | pathogenic | 0.219 | Stabilizing | 1.0 | D | 0.717 | prob.delet. | D | 0.559211169 | None | None | N |
N/K | 0.9941 | likely_pathogenic | 0.9951 | pathogenic | -0.338 | Destabilizing | 1.0 | D | 0.713 | prob.delet. | D | 0.5584507 | None | None | N |
N/L | 0.9406 | likely_pathogenic | 0.9417 | pathogenic | 0.219 | Stabilizing | 1.0 | D | 0.726 | prob.delet. | None | None | None | None | N |
N/M | 0.9802 | likely_pathogenic | 0.9808 | pathogenic | 0.715 | Stabilizing | 1.0 | D | 0.726 | prob.delet. | None | None | None | None | N |
N/P | 0.9814 | likely_pathogenic | 0.9834 | pathogenic | -0.036 | Destabilizing | 0.999 | D | 0.725 | prob.delet. | None | None | None | None | N |
N/Q | 0.9909 | likely_pathogenic | 0.9919 | pathogenic | -0.977 | Destabilizing | 1.0 | D | 0.73 | prob.delet. | None | None | None | None | N |
N/R | 0.9885 | likely_pathogenic | 0.9907 | pathogenic | -0.378 | Destabilizing | 1.0 | D | 0.741 | deleterious | None | None | None | None | N |
N/S | 0.3438 | ambiguous | 0.376 | ambiguous | -0.865 | Destabilizing | 0.996 | D | 0.567 | neutral | N | 0.48491759 | None | None | N |
N/T | 0.7512 | likely_pathogenic | 0.7812 | pathogenic | -0.602 | Destabilizing | 0.998 | D | 0.681 | prob.neutral | D | 0.539839466 | None | None | N |
N/V | 0.9657 | likely_pathogenic | 0.9692 | pathogenic | -0.036 | Destabilizing | 0.998 | D | 0.729 | prob.delet. | None | None | None | None | N |
N/W | 0.9987 | likely_pathogenic | 0.9988 | pathogenic | -0.274 | Destabilizing | 1.0 | D | 0.679 | prob.neutral | None | None | None | None | N |
N/Y | 0.9721 | likely_pathogenic | 0.9751 | pathogenic | -0.013 | Destabilizing | 1.0 | D | 0.735 | prob.delet. | D | 0.547601374 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.