Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7687 | 23284;23285;23286 | chr2:178720960;178720959;178720958 | chr2:179585687;179585686;179585685 |
N2AB | 7370 | 22333;22334;22335 | chr2:178720960;178720959;178720958 | chr2:179585687;179585686;179585685 |
N2A | 6443 | 19552;19553;19554 | chr2:178720960;178720959;178720958 | chr2:179585687;179585686;179585685 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/I | None | None | 0.78 | N | 0.382 | 0.22 | 0.562540394707 | gnomAD-4.0.0 | 1.62139E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.44818E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.0874 | likely_benign | 0.1178 | benign | -0.379 | Destabilizing | 0.004 | N | 0.257 | neutral | N | 0.392163435 | None | None | I |
V/C | 0.7218 | likely_pathogenic | 0.8071 | pathogenic | -0.867 | Destabilizing | 0.997 | D | 0.505 | neutral | None | None | None | None | I |
V/D | 0.4713 | ambiguous | 0.5981 | pathogenic | -0.289 | Destabilizing | 0.984 | D | 0.612 | neutral | N | 0.506460519 | None | None | I |
V/E | 0.4129 | ambiguous | 0.5167 | ambiguous | -0.403 | Destabilizing | 0.976 | D | 0.529 | neutral | None | None | None | None | I |
V/F | 0.1251 | likely_benign | 0.178 | benign | -0.758 | Destabilizing | 0.984 | D | 0.485 | neutral | N | 0.488807335 | None | None | I |
V/G | 0.2496 | likely_benign | 0.318 | benign | -0.421 | Destabilizing | 0.811 | D | 0.518 | neutral | D | 0.525960213 | None | None | I |
V/H | 0.633 | likely_pathogenic | 0.7646 | pathogenic | -0.025 | Destabilizing | 0.999 | D | 0.636 | neutral | None | None | None | None | I |
V/I | 0.0805 | likely_benign | 0.0922 | benign | -0.403 | Destabilizing | 0.78 | D | 0.382 | neutral | N | 0.497061459 | None | None | I |
V/K | 0.6276 | likely_pathogenic | 0.7494 | pathogenic | -0.383 | Destabilizing | 0.976 | D | 0.538 | neutral | None | None | None | None | I |
V/L | 0.2257 | likely_benign | 0.3225 | benign | -0.403 | Destabilizing | 0.78 | D | 0.391 | neutral | N | 0.475454035 | None | None | I |
V/M | 0.1458 | likely_benign | 0.194 | benign | -0.62 | Destabilizing | 0.996 | D | 0.425 | neutral | None | None | None | None | I |
V/N | 0.3617 | ambiguous | 0.4698 | ambiguous | -0.205 | Destabilizing | 0.988 | D | 0.627 | neutral | None | None | None | None | I |
V/P | 0.7586 | likely_pathogenic | 0.8551 | pathogenic | -0.369 | Destabilizing | 0.988 | D | 0.581 | neutral | None | None | None | None | I |
V/Q | 0.4838 | ambiguous | 0.5966 | pathogenic | -0.402 | Destabilizing | 0.988 | D | 0.608 | neutral | None | None | None | None | I |
V/R | 0.5303 | ambiguous | 0.6649 | pathogenic | 0.041 | Stabilizing | 0.988 | D | 0.621 | neutral | None | None | None | None | I |
V/S | 0.1709 | likely_benign | 0.2301 | benign | -0.532 | Destabilizing | 0.851 | D | 0.513 | neutral | None | None | None | None | I |
V/T | 0.1624 | likely_benign | 0.2143 | benign | -0.557 | Destabilizing | 0.919 | D | 0.348 | neutral | None | None | None | None | I |
V/W | 0.7635 | likely_pathogenic | 0.8787 | pathogenic | -0.795 | Destabilizing | 0.999 | D | 0.675 | prob.neutral | None | None | None | None | I |
V/Y | 0.5021 | ambiguous | 0.6572 | pathogenic | -0.54 | Destabilizing | 0.996 | D | 0.479 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.