Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7689 | 23290;23291;23292 | chr2:178720954;178720953;178720952 | chr2:179585681;179585680;179585679 |
N2AB | 7372 | 22339;22340;22341 | chr2:178720954;178720953;178720952 | chr2:179585681;179585680;179585679 |
N2A | 6445 | 19558;19559;19560 | chr2:178720954;178720953;178720952 | chr2:179585681;179585680;179585679 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/N | rs727505052 | -0.141 | 0.101 | N | 0.278 | 0.068 | 0.144782658237 | gnomAD-2.1.1 | 1.43E-05 | None | None | None | None | N | None | 8.28E-05 | 0 | None | 0 | 1.02606E-04 | None | 0 | None | 0 | 0 | 0 |
D/N | rs727505052 | -0.141 | 0.101 | N | 0.278 | 0.068 | 0.144782658237 | gnomAD-3.1.2 | 3.94E-05 | None | None | None | None | N | None | 7.24E-05 | 1.30941E-04 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 4.77555E-04 |
D/N | rs727505052 | -0.141 | 0.101 | N | 0.278 | 0.068 | 0.144782658237 | gnomAD-4.0.0 | 1.93654E-05 | None | None | None | None | N | None | 8.0156E-05 | 3.34717E-05 | None | 0 | 1.12329E-04 | None | 0 | 0 | 1.71034E-06 | 0 | 2.5859E-04 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.1007 | likely_benign | 0.131 | benign | -0.189 | Destabilizing | 0.047 | N | 0.365 | neutral | N | 0.405823379 | None | None | N |
D/C | 0.4016 | ambiguous | 0.584 | pathogenic | 0.18 | Stabilizing | 0.002 | N | 0.377 | neutral | None | None | None | None | N |
D/E | 0.1066 | likely_benign | 0.1391 | benign | -0.306 | Destabilizing | 0.002 | N | 0.121 | neutral | N | 0.346292286 | None | None | N |
D/F | 0.2571 | likely_benign | 0.3722 | ambiguous | -0.289 | Destabilizing | 0.716 | D | 0.544 | neutral | None | None | None | None | N |
D/G | 0.1237 | likely_benign | 0.1763 | benign | -0.366 | Destabilizing | 0.183 | N | 0.405 | neutral | N | 0.465853117 | None | None | N |
D/H | 0.093 | likely_benign | 0.1553 | benign | -0.185 | Destabilizing | 0.002 | N | 0.255 | neutral | N | 0.458388427 | None | None | N |
D/I | 0.1688 | likely_benign | 0.2391 | benign | 0.218 | Stabilizing | 0.418 | N | 0.576 | neutral | None | None | None | None | N |
D/K | 0.1422 | likely_benign | 0.2404 | benign | 0.414 | Stabilizing | 0.129 | N | 0.421 | neutral | None | None | None | None | N |
D/L | 0.1723 | likely_benign | 0.2621 | benign | 0.218 | Stabilizing | 0.129 | N | 0.528 | neutral | None | None | None | None | N |
D/M | 0.3165 | likely_benign | 0.4269 | ambiguous | 0.381 | Stabilizing | 0.94 | D | 0.526 | neutral | None | None | None | None | N |
D/N | 0.0657 | likely_benign | 0.0854 | benign | 0.222 | Stabilizing | 0.101 | N | 0.278 | neutral | N | 0.424025137 | None | None | N |
D/P | 0.6029 | likely_pathogenic | 0.8039 | pathogenic | 0.104 | Stabilizing | 0.593 | D | 0.474 | neutral | None | None | None | None | N |
D/Q | 0.128 | likely_benign | 0.2157 | benign | 0.223 | Stabilizing | 0.264 | N | 0.3 | neutral | None | None | None | None | N |
D/R | 0.1363 | likely_benign | 0.2576 | benign | 0.493 | Stabilizing | 0.418 | N | 0.531 | neutral | None | None | None | None | N |
D/S | 0.0744 | likely_benign | 0.0931 | benign | 0.11 | Stabilizing | 0.012 | N | 0.133 | neutral | None | None | None | None | N |
D/T | 0.1076 | likely_benign | 0.1594 | benign | 0.242 | Stabilizing | 0.004 | N | 0.194 | neutral | None | None | None | None | N |
D/V | 0.1097 | likely_benign | 0.1425 | benign | 0.104 | Stabilizing | 0.101 | N | 0.524 | neutral | N | 0.429759031 | None | None | N |
D/W | 0.6153 | likely_pathogenic | 0.7614 | pathogenic | -0.212 | Destabilizing | 0.983 | D | 0.516 | neutral | None | None | None | None | N |
D/Y | 0.0992 | likely_benign | 0.1384 | benign | -0.058 | Destabilizing | 0.487 | N | 0.549 | neutral | N | 0.462332809 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.