Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7691 | 23296;23297;23298 | chr2:178720948;178720947;178720946 | chr2:179585675;179585674;179585673 |
N2AB | 7374 | 22345;22346;22347 | chr2:178720948;178720947;178720946 | chr2:179585675;179585674;179585673 |
N2A | 6447 | 19564;19565;19566 | chr2:178720948;178720947;178720946 | chr2:179585675;179585674;179585673 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/N | None | None | 0.161 | N | 0.479 | 0.172 | 0.290222751274 | gnomAD-4.0.0 | 3.26339E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.9234E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.1134 | likely_benign | 0.1263 | benign | -0.589 | Destabilizing | 0.032 | N | 0.421 | neutral | None | None | None | None | N |
S/C | 0.2471 | likely_benign | 0.2774 | benign | -0.309 | Destabilizing | 0.978 | D | 0.724 | prob.delet. | N | 0.514018162 | None | None | N |
S/D | 0.5803 | likely_pathogenic | 0.7609 | pathogenic | 0.064 | Stabilizing | 0.685 | D | 0.491 | neutral | None | None | None | None | N |
S/E | 0.6665 | likely_pathogenic | 0.8045 | pathogenic | 0.024 | Stabilizing | 0.752 | D | 0.484 | neutral | None | None | None | None | N |
S/F | 0.2244 | likely_benign | 0.2867 | benign | -0.879 | Destabilizing | 0.983 | D | 0.771 | deleterious | None | None | None | None | N |
S/G | 0.1505 | likely_benign | 0.2015 | benign | -0.793 | Destabilizing | 0.752 | D | 0.455 | neutral | D | 0.524778583 | None | None | N |
S/H | 0.35 | ambiguous | 0.5173 | ambiguous | -1.209 | Destabilizing | 0.998 | D | 0.719 | prob.delet. | None | None | None | None | N |
S/I | 0.195 | likely_benign | 0.2763 | benign | -0.164 | Destabilizing | 0.915 | D | 0.749 | deleterious | N | 0.494748592 | None | None | N |
S/K | 0.6604 | likely_pathogenic | 0.8672 | pathogenic | -0.655 | Destabilizing | 0.89 | D | 0.482 | neutral | None | None | None | None | N |
S/L | 0.1492 | likely_benign | 0.1883 | benign | -0.164 | Destabilizing | 0.802 | D | 0.609 | neutral | None | None | None | None | N |
S/M | 0.2814 | likely_benign | 0.3551 | ambiguous | 0.033 | Stabilizing | 0.995 | D | 0.722 | prob.delet. | None | None | None | None | N |
S/N | 0.175 | likely_benign | 0.2874 | benign | -0.402 | Destabilizing | 0.161 | N | 0.479 | neutral | N | 0.492342282 | None | None | N |
S/P | 0.8771 | likely_pathogenic | 0.9143 | pathogenic | -0.273 | Destabilizing | 0.939 | D | 0.743 | deleterious | None | None | None | None | N |
S/Q | 0.5259 | ambiguous | 0.6961 | pathogenic | -0.564 | Destabilizing | 0.983 | D | 0.639 | neutral | None | None | None | None | N |
S/R | 0.5017 | ambiguous | 0.7548 | pathogenic | -0.486 | Destabilizing | 0.955 | D | 0.751 | deleterious | N | 0.516359295 | None | None | N |
S/T | 0.1035 | likely_benign | 0.1264 | benign | -0.471 | Destabilizing | 0.001 | N | 0.357 | neutral | N | 0.494479726 | None | None | N |
S/V | 0.216 | likely_benign | 0.2794 | benign | -0.273 | Destabilizing | 0.842 | D | 0.682 | prob.neutral | None | None | None | None | N |
S/W | 0.4465 | ambiguous | 0.5655 | pathogenic | -0.874 | Destabilizing | 0.998 | D | 0.751 | deleterious | None | None | None | None | N |
S/Y | 0.2259 | likely_benign | 0.3116 | benign | -0.622 | Destabilizing | 0.983 | D | 0.768 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.