Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7698 | 23317;23318;23319 | chr2:178720927;178720926;178720925 | chr2:179585654;179585653;179585652 |
N2AB | 7381 | 22366;22367;22368 | chr2:178720927;178720926;178720925 | chr2:179585654;179585653;179585652 |
N2A | 6454 | 19585;19586;19587 | chr2:178720927;178720926;178720925 | chr2:179585654;179585653;179585652 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/G | rs1346948752 | -1.4 | 0.91 | D | 0.721 | 0.727 | 0.955249955587 | gnomAD-2.1.1 | 4.13E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 4.7E-05 | 0 | 0 |
V/G | rs1346948752 | -1.4 | 0.91 | D | 0.721 | 0.727 | 0.955249955587 | gnomAD-4.0.0 | 1.00154E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 9.50823E-05 | 0 | 3.0275E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.8931 | likely_pathogenic | 0.8921 | pathogenic | -1.508 | Destabilizing | 0.298 | N | 0.611 | neutral | D | 0.630358732 | None | None | N |
V/C | 0.9805 | likely_pathogenic | 0.9769 | pathogenic | -1.67 | Destabilizing | 0.979 | D | 0.719 | prob.delet. | None | None | None | None | N |
V/D | 0.9962 | likely_pathogenic | 0.9956 | pathogenic | -2.248 | Highly Destabilizing | 0.997 | D | 0.739 | prob.delet. | None | None | None | None | N |
V/E | 0.985 | likely_pathogenic | 0.9808 | pathogenic | -2.243 | Highly Destabilizing | 0.974 | D | 0.712 | prob.delet. | D | 0.647215671 | None | None | N |
V/F | 0.7325 | likely_pathogenic | 0.7324 | pathogenic | -1.419 | Destabilizing | 0.904 | D | 0.721 | prob.delet. | None | None | None | None | N |
V/G | 0.9477 | likely_pathogenic | 0.9443 | pathogenic | -1.791 | Destabilizing | 0.91 | D | 0.721 | prob.delet. | D | 0.647215671 | None | None | N |
V/H | 0.9961 | likely_pathogenic | 0.9947 | pathogenic | -1.272 | Destabilizing | 0.984 | D | 0.722 | prob.delet. | None | None | None | None | N |
V/I | 0.074 | likely_benign | 0.0799 | benign | -0.82 | Destabilizing | None | N | 0.468 | neutral | None | None | None | None | N |
V/K | 0.9907 | likely_pathogenic | 0.9869 | pathogenic | -1.237 | Destabilizing | 0.991 | D | 0.712 | prob.delet. | None | None | None | None | N |
V/L | 0.5236 | ambiguous | 0.5273 | ambiguous | -0.82 | Destabilizing | 0.012 | N | 0.64 | neutral | D | 0.593515992 | None | None | N |
V/M | 0.537 | ambiguous | 0.5011 | ambiguous | -0.858 | Destabilizing | 0.835 | D | 0.727 | prob.delet. | D | 0.646812062 | None | None | N |
V/N | 0.9837 | likely_pathogenic | 0.9779 | pathogenic | -1.279 | Destabilizing | 0.98 | D | 0.743 | deleterious | None | None | None | None | N |
V/P | 0.9838 | likely_pathogenic | 0.9897 | pathogenic | -1.019 | Destabilizing | 0.98 | D | 0.721 | prob.delet. | None | None | None | None | N |
V/Q | 0.9847 | likely_pathogenic | 0.9789 | pathogenic | -1.529 | Destabilizing | 0.996 | D | 0.731 | prob.delet. | None | None | None | None | N |
V/R | 0.9843 | likely_pathogenic | 0.9783 | pathogenic | -0.731 | Destabilizing | 0.996 | D | 0.741 | deleterious | None | None | None | None | N |
V/S | 0.9593 | likely_pathogenic | 0.9531 | pathogenic | -1.735 | Destabilizing | 0.8 | D | 0.693 | prob.neutral | None | None | None | None | N |
V/T | 0.9002 | likely_pathogenic | 0.8927 | pathogenic | -1.625 | Destabilizing | 0.185 | N | 0.691 | prob.neutral | None | None | None | None | N |
V/W | 0.9942 | likely_pathogenic | 0.9937 | pathogenic | -1.593 | Destabilizing | 0.996 | D | 0.688 | prob.neutral | None | None | None | None | N |
V/Y | 0.9813 | likely_pathogenic | 0.9789 | pathogenic | -1.242 | Destabilizing | 0.881 | D | 0.727 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.