Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7703 | 23332;23333;23334 | chr2:178720655;178720654;178720653 | chr2:179585382;179585381;179585380 |
N2AB | 7386 | 22381;22382;22383 | chr2:178720655;178720654;178720653 | chr2:179585382;179585381;179585380 |
N2A | 6459 | 19600;19601;19602 | chr2:178720655;178720654;178720653 | chr2:179585382;179585381;179585380 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/I | rs1318077959 | -0.088 | None | N | 0.199 | 0.106 | 0.180583059064 | gnomAD-2.1.1 | 4.56E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 6.18E-05 | None | 0 | None | 0 | 0 | 0 |
V/I | rs1318077959 | -0.088 | None | N | 0.199 | 0.106 | 0.180583059064 | gnomAD-4.0.0 | 3.34496E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 5.59441E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.1473 | likely_benign | 0.1194 | benign | -0.824 | Destabilizing | 0.063 | N | 0.32 | neutral | N | 0.500581766 | None | None | N |
V/C | 0.6699 | likely_pathogenic | 0.6157 | pathogenic | -0.819 | Destabilizing | 0.972 | D | 0.462 | neutral | None | None | None | None | N |
V/D | 0.3168 | likely_benign | 0.2776 | benign | -0.016 | Destabilizing | 0.286 | N | 0.527 | neutral | N | 0.518610167 | None | None | N |
V/E | 0.2307 | likely_benign | 0.2051 | benign | -0.045 | Destabilizing | 0.005 | N | 0.297 | neutral | None | None | None | None | N |
V/F | 0.1372 | likely_benign | 0.119 | benign | -0.616 | Destabilizing | 0.679 | D | 0.519 | neutral | N | 0.487961973 | None | None | N |
V/G | 0.2082 | likely_benign | 0.1815 | benign | -1.08 | Destabilizing | 0.52 | D | 0.509 | neutral | N | 0.497622201 | None | None | N |
V/H | 0.387 | ambiguous | 0.3404 | ambiguous | -0.499 | Destabilizing | 0.979 | D | 0.546 | neutral | None | None | None | None | N |
V/I | 0.0689 | likely_benign | 0.0659 | benign | -0.259 | Destabilizing | None | N | 0.199 | neutral | N | 0.489039408 | None | None | N |
V/K | 0.2428 | likely_benign | 0.2242 | benign | -0.576 | Destabilizing | 0.272 | N | 0.488 | neutral | None | None | None | None | N |
V/L | 0.1302 | likely_benign | 0.1062 | benign | -0.259 | Destabilizing | None | N | 0.169 | neutral | D | 0.523709342 | None | None | N |
V/M | 0.1189 | likely_benign | 0.1011 | benign | -0.382 | Destabilizing | 0.667 | D | 0.457 | neutral | None | None | None | None | N |
V/N | 0.1801 | likely_benign | 0.1495 | benign | -0.418 | Destabilizing | 0.163 | N | 0.548 | neutral | None | None | None | None | N |
V/P | 0.8921 | likely_pathogenic | 0.8587 | pathogenic | -0.41 | Destabilizing | 0.283 | N | 0.56 | neutral | None | None | None | None | N |
V/Q | 0.2208 | likely_benign | 0.1945 | benign | -0.539 | Destabilizing | 0.482 | N | 0.552 | neutral | None | None | None | None | N |
V/R | 0.1986 | likely_benign | 0.1854 | benign | -0.163 | Destabilizing | 0.737 | D | 0.566 | neutral | None | None | None | None | N |
V/S | 0.1381 | likely_benign | 0.1182 | benign | -0.991 | Destabilizing | 0.017 | N | 0.306 | neutral | None | None | None | None | N |
V/T | 0.135 | likely_benign | 0.1098 | benign | -0.895 | Destabilizing | 0.001 | N | 0.138 | neutral | None | None | None | None | N |
V/W | 0.7681 | likely_pathogenic | 0.7153 | pathogenic | -0.728 | Destabilizing | 0.994 | D | 0.637 | neutral | None | None | None | None | N |
V/Y | 0.4218 | ambiguous | 0.3685 | ambiguous | -0.418 | Destabilizing | 0.85 | D | 0.507 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.