Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7710 | 23353;23354;23355 | chr2:178720634;178720633;178720632 | chr2:179585361;179585360;179585359 |
N2AB | 7393 | 22402;22403;22404 | chr2:178720634;178720633;178720632 | chr2:179585361;179585360;179585359 |
N2A | 6466 | 19621;19622;19623 | chr2:178720634;178720633;178720632 | chr2:179585361;179585360;179585359 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/L | None | None | 0.973 | N | 0.674 | 0.278 | 0.438913950225 | gnomAD-4.0.0 | 6.88837E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.02635E-07 | 0 | 0 |
P/S | rs1157011296 | None | 0.082 | N | 0.279 | 0.088 | 0.0954503805726 | gnomAD-4.0.0 | 1.37752E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.80514E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.0619 | likely_benign | 0.0621 | benign | -0.364 | Destabilizing | 0.295 | N | 0.405 | neutral | N | 0.460616412 | None | None | N |
P/C | 0.3901 | ambiguous | 0.4256 | ambiguous | -0.629 | Destabilizing | 0.989 | D | 0.673 | neutral | None | None | None | None | N |
P/D | 0.3023 | likely_benign | 0.3125 | benign | -0.1 | Destabilizing | 0.001 | N | 0.301 | neutral | None | None | None | None | N |
P/E | 0.2076 | likely_benign | 0.2134 | benign | -0.215 | Destabilizing | 0.176 | N | 0.501 | neutral | None | None | None | None | N |
P/F | 0.3014 | likely_benign | 0.3219 | benign | -0.6 | Destabilizing | 0.997 | D | 0.675 | prob.neutral | None | None | None | None | N |
P/G | 0.2609 | likely_benign | 0.2711 | benign | -0.481 | Destabilizing | 0.579 | D | 0.495 | neutral | None | None | None | None | N |
P/H | 0.1526 | likely_benign | 0.161 | benign | -0.062 | Destabilizing | 0.993 | D | 0.585 | neutral | None | None | None | None | N |
P/I | 0.1951 | likely_benign | 0.1973 | benign | -0.21 | Destabilizing | 0.99 | D | 0.701 | prob.neutral | None | None | None | None | N |
P/K | 0.2945 | likely_benign | 0.3104 | benign | -0.337 | Destabilizing | 0.96 | D | 0.582 | neutral | None | None | None | None | N |
P/L | 0.0907 | likely_benign | 0.0931 | benign | -0.21 | Destabilizing | 0.973 | D | 0.674 | neutral | N | 0.454780288 | None | None | N |
P/M | 0.2142 | likely_benign | 0.2203 | benign | -0.347 | Destabilizing | 0.998 | D | 0.59 | neutral | None | None | None | None | N |
P/N | 0.2337 | likely_benign | 0.2385 | benign | -0.093 | Destabilizing | 0.748 | D | 0.597 | neutral | None | None | None | None | N |
P/Q | 0.1301 | likely_benign | 0.1355 | benign | -0.319 | Destabilizing | 0.931 | D | 0.612 | neutral | N | 0.457173371 | None | None | N |
P/R | 0.1801 | likely_benign | 0.1901 | benign | 0.137 | Stabilizing | 0.973 | D | 0.627 | neutral | N | 0.454780288 | None | None | N |
P/S | 0.0873 | likely_benign | 0.0894 | benign | -0.462 | Destabilizing | 0.082 | N | 0.279 | neutral | N | 0.447028843 | None | None | N |
P/T | 0.0797 | likely_benign | 0.0797 | benign | -0.475 | Destabilizing | 0.39 | N | 0.546 | neutral | N | 0.502826198 | None | None | N |
P/V | 0.1349 | likely_benign | 0.1377 | benign | -0.227 | Destabilizing | 0.893 | D | 0.625 | neutral | None | None | None | None | N |
P/W | 0.5176 | ambiguous | 0.5472 | ambiguous | -0.677 | Destabilizing | 0.999 | D | 0.652 | neutral | None | None | None | None | N |
P/Y | 0.3299 | likely_benign | 0.351 | ambiguous | -0.374 | Destabilizing | 0.999 | D | 0.677 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.