Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7711 | 23356;23357;23358 | chr2:178720631;178720630;178720629 | chr2:179585358;179585357;179585356 |
N2AB | 7394 | 22405;22406;22407 | chr2:178720631;178720630;178720629 | chr2:179585358;179585357;179585356 |
N2A | 6467 | 19624;19625;19626 | chr2:178720631;178720630;178720629 | chr2:179585358;179585357;179585356 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | None | None | 0.003 | N | 0.225 | 0.242 | 0.417843521124 | gnomAD-4.0.0 | 1.60995E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.88123E-06 | 0 | 0 |
V/L | rs771533917 | -0.173 | None | N | 0.103 | 0.155 | 0.107399877778 | gnomAD-2.1.1 | 1.67E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 3.66E-05 | 0 |
V/L | rs771533917 | -0.173 | None | N | 0.103 | 0.155 | 0.107399877778 | gnomAD-4.0.0 | 3.4435E-06 | None | None | None | None | N | None | 3.04173E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 3.61013E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.1108 | likely_benign | 0.1124 | benign | -0.924 | Destabilizing | 0.003 | N | 0.225 | neutral | N | 0.50252878 | None | None | N |
V/C | 0.6842 | likely_pathogenic | 0.6909 | pathogenic | -0.793 | Destabilizing | 0.961 | D | 0.424 | neutral | None | None | None | None | N |
V/D | 0.3887 | ambiguous | 0.4222 | ambiguous | -0.341 | Destabilizing | 0.841 | D | 0.555 | neutral | None | None | None | None | N |
V/E | 0.2605 | likely_benign | 0.286 | benign | -0.377 | Destabilizing | 0.392 | N | 0.481 | neutral | N | 0.508301078 | None | None | N |
V/F | 0.1302 | likely_benign | 0.1352 | benign | -0.742 | Destabilizing | 0.496 | N | 0.402 | neutral | None | None | None | None | N |
V/G | 0.2203 | likely_benign | 0.2296 | benign | -1.187 | Destabilizing | 0.727 | D | 0.471 | neutral | N | 0.513314281 | None | None | N |
V/H | 0.4766 | ambiguous | 0.5011 | ambiguous | -0.77 | Destabilizing | 0.97 | D | 0.568 | neutral | None | None | None | None | N |
V/I | 0.0722 | likely_benign | 0.0725 | benign | -0.336 | Destabilizing | None | N | 0.114 | neutral | N | 0.505337012 | None | None | N |
V/K | 0.3028 | likely_benign | 0.3352 | benign | -0.776 | Destabilizing | 0.651 | D | 0.482 | neutral | None | None | None | None | N |
V/L | 0.1386 | likely_benign | 0.1479 | benign | -0.336 | Destabilizing | None | N | 0.103 | neutral | N | 0.502835425 | None | None | N |
V/M | 0.1142 | likely_benign | 0.1199 | benign | -0.375 | Destabilizing | 0.584 | D | 0.392 | neutral | None | None | None | None | N |
V/N | 0.2746 | likely_benign | 0.2944 | benign | -0.536 | Destabilizing | 0.458 | N | 0.563 | neutral | None | None | None | None | N |
V/P | 0.6421 | likely_pathogenic | 0.6744 | pathogenic | -0.495 | Destabilizing | 0.458 | N | 0.513 | neutral | None | None | None | None | N |
V/Q | 0.2604 | likely_benign | 0.2783 | benign | -0.681 | Destabilizing | 0.801 | D | 0.527 | neutral | None | None | None | None | N |
V/R | 0.2671 | likely_benign | 0.2931 | benign | -0.365 | Destabilizing | 0.799 | D | 0.558 | neutral | None | None | None | None | N |
V/S | 0.1682 | likely_benign | 0.1713 | benign | -1.057 | Destabilizing | 0.347 | N | 0.446 | neutral | None | None | None | None | N |
V/T | 0.1213 | likely_benign | 0.1236 | benign | -0.975 | Destabilizing | 0.109 | N | 0.353 | neutral | None | None | None | None | N |
V/W | 0.7279 | likely_pathogenic | 0.7442 | pathogenic | -0.888 | Destabilizing | 0.992 | D | 0.642 | neutral | None | None | None | None | N |
V/Y | 0.4886 | ambiguous | 0.5032 | ambiguous | -0.578 | Destabilizing | 0.799 | D | 0.425 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.