Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7718 | 23377;23378;23379 | chr2:178720610;178720609;178720608 | chr2:179585337;179585336;179585335 |
N2AB | 7401 | 22426;22427;22428 | chr2:178720610;178720609;178720608 | chr2:179585337;179585336;179585335 |
N2A | 6474 | 19645;19646;19647 | chr2:178720610;178720609;178720608 | chr2:179585337;179585336;179585335 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/G | rs1216947854 | -0.905 | 0.861 | N | 0.324 | 0.278 | 0.154104182512 | gnomAD-2.1.1 | 4.05E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.94E-06 | 0 |
D/G | rs1216947854 | -0.905 | 0.861 | N | 0.324 | 0.278 | 0.154104182512 | gnomAD-4.0.0 | 4.10825E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.39864E-06 | 0 | 0 |
D/N | None | None | 0.111 | N | 0.189 | 0.146 | 0.0954503805726 | gnomAD-4.0.0 | 6.84766E-07 | None | None | None | None | N | None | 2.99904E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.6415 | likely_pathogenic | 0.5761 | pathogenic | -0.425 | Destabilizing | 0.218 | N | 0.293 | neutral | N | 0.506271935 | None | None | N |
D/C | 0.9678 | likely_pathogenic | 0.9561 | pathogenic | -0.115 | Destabilizing | 0.998 | D | 0.445 | neutral | None | None | None | None | N |
D/E | 0.4969 | ambiguous | 0.4877 | ambiguous | -0.481 | Destabilizing | 0.007 | N | 0.181 | neutral | N | 0.467694904 | None | None | N |
D/F | 0.9718 | likely_pathogenic | 0.9616 | pathogenic | -0.075 | Destabilizing | 1.0 | D | 0.442 | neutral | None | None | None | None | N |
D/G | 0.707 | likely_pathogenic | 0.6596 | pathogenic | -0.724 | Destabilizing | 0.861 | D | 0.324 | neutral | N | 0.486331217 | None | None | N |
D/H | 0.8033 | likely_pathogenic | 0.77 | pathogenic | -0.206 | Destabilizing | 0.995 | D | 0.386 | neutral | N | 0.473102034 | None | None | N |
D/I | 0.932 | likely_pathogenic | 0.9046 | pathogenic | 0.344 | Stabilizing | 0.999 | D | 0.445 | neutral | None | None | None | None | N |
D/K | 0.9229 | likely_pathogenic | 0.9057 | pathogenic | -0.027 | Destabilizing | 0.98 | D | 0.303 | neutral | None | None | None | None | N |
D/L | 0.9188 | likely_pathogenic | 0.9004 | pathogenic | 0.344 | Stabilizing | 0.99 | D | 0.379 | neutral | None | None | None | None | N |
D/M | 0.9667 | likely_pathogenic | 0.9568 | pathogenic | 0.626 | Stabilizing | 1.0 | D | 0.438 | neutral | None | None | None | None | N |
D/N | 0.2695 | likely_benign | 0.2372 | benign | -0.52 | Destabilizing | 0.111 | N | 0.189 | neutral | N | 0.474794235 | None | None | N |
D/P | 0.9201 | likely_pathogenic | 0.9062 | pathogenic | 0.112 | Stabilizing | 0.933 | D | 0.372 | neutral | None | None | None | None | N |
D/Q | 0.8704 | likely_pathogenic | 0.8541 | pathogenic | -0.396 | Destabilizing | 0.992 | D | 0.308 | neutral | None | None | None | None | N |
D/R | 0.93 | likely_pathogenic | 0.9152 | pathogenic | 0.155 | Stabilizing | 0.997 | D | 0.394 | neutral | None | None | None | None | N |
D/S | 0.4106 | ambiguous | 0.3573 | ambiguous | -0.664 | Destabilizing | 0.518 | D | 0.153 | neutral | None | None | None | None | N |
D/T | 0.7461 | likely_pathogenic | 0.6842 | pathogenic | -0.416 | Destabilizing | 0.86 | D | 0.309 | neutral | None | None | None | None | N |
D/V | 0.8177 | likely_pathogenic | 0.7596 | pathogenic | 0.112 | Stabilizing | 0.929 | D | 0.375 | neutral | N | 0.509946958 | None | None | N |
D/W | 0.9942 | likely_pathogenic | 0.9924 | pathogenic | 0.12 | Stabilizing | 1.0 | D | 0.593 | neutral | None | None | None | None | N |
D/Y | 0.8291 | likely_pathogenic | 0.7865 | pathogenic | 0.169 | Stabilizing | 0.999 | D | 0.443 | neutral | N | 0.482318745 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.