Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7720 | 23383;23384;23385 | chr2:178720604;178720603;178720602 | chr2:179585331;179585330;179585329 |
N2AB | 7403 | 22432;22433;22434 | chr2:178720604;178720603;178720602 | chr2:179585331;179585330;179585329 |
N2A | 6476 | 19651;19652;19653 | chr2:178720604;178720603;178720602 | chr2:179585331;179585330;179585329 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/V | rs757989250 | -0.882 | None | N | 0.316 | 0.058 | 0.152612264143 | gnomAD-2.1.1 | 8.08E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 6.55E-05 | None | 0 | 0 | 0 |
I/V | rs757989250 | -0.882 | None | N | 0.316 | 0.058 | 0.152612264143 | gnomAD-4.0.0 | 4.77815E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 2.86763E-05 | 3.02792E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.2212 | likely_benign | 0.2516 | benign | -1.457 | Destabilizing | 0.007 | N | 0.405 | neutral | None | None | None | None | N |
I/C | 0.5589 | ambiguous | 0.6059 | pathogenic | -0.816 | Destabilizing | 0.001 | N | 0.395 | neutral | None | None | None | None | N |
I/D | 0.4866 | ambiguous | 0.5066 | ambiguous | -0.968 | Destabilizing | 0.038 | N | 0.485 | neutral | None | None | None | None | N |
I/E | 0.3993 | ambiguous | 0.4225 | ambiguous | -0.973 | Destabilizing | 0.072 | N | 0.474 | neutral | None | None | None | None | N |
I/F | 0.111 | likely_benign | 0.1203 | benign | -1.002 | Destabilizing | 0.029 | N | 0.414 | neutral | N | 0.495342865 | None | None | N |
I/G | 0.4706 | ambiguous | 0.5305 | ambiguous | -1.763 | Destabilizing | 0.038 | N | 0.465 | neutral | None | None | None | None | N |
I/H | 0.2759 | likely_benign | 0.297 | benign | -0.933 | Destabilizing | 0.214 | N | 0.485 | neutral | None | None | None | None | N |
I/K | 0.2582 | likely_benign | 0.2704 | benign | -1.051 | Destabilizing | 0.072 | N | 0.483 | neutral | None | None | None | None | N |
I/L | 0.0913 | likely_benign | 0.0984 | benign | -0.699 | Destabilizing | None | N | 0.319 | neutral | N | 0.395813376 | None | None | N |
I/M | 0.0867 | likely_benign | 0.0932 | benign | -0.547 | Destabilizing | 0.005 | N | 0.421 | neutral | N | 0.416767438 | None | None | N |
I/N | 0.1508 | likely_benign | 0.1531 | benign | -0.845 | Destabilizing | None | N | 0.473 | neutral | N | 0.428368512 | None | None | N |
I/P | 0.7782 | likely_pathogenic | 0.8195 | pathogenic | -0.92 | Destabilizing | 0.356 | N | 0.541 | neutral | None | None | None | None | N |
I/Q | 0.2744 | likely_benign | 0.2954 | benign | -1.013 | Destabilizing | 0.356 | N | 0.536 | neutral | None | None | None | None | N |
I/R | 0.1993 | likely_benign | 0.2099 | benign | -0.44 | Destabilizing | 0.214 | N | 0.55 | neutral | None | None | None | None | N |
I/S | 0.1594 | likely_benign | 0.1715 | benign | -1.401 | Destabilizing | 0.002 | N | 0.429 | neutral | N | 0.361047441 | None | None | N |
I/T | 0.1222 | likely_benign | 0.1314 | benign | -1.288 | Destabilizing | 0.012 | N | 0.449 | neutral | N | 0.370221498 | None | None | N |
I/V | 0.0655 | likely_benign | 0.0686 | benign | -0.92 | Destabilizing | None | N | 0.316 | neutral | N | 0.385249666 | None | None | N |
I/W | 0.6631 | likely_pathogenic | 0.7084 | pathogenic | -1.074 | Destabilizing | 0.676 | D | 0.495 | neutral | None | None | None | None | N |
I/Y | 0.349 | ambiguous | 0.3596 | ambiguous | -0.861 | Destabilizing | 0.001 | N | 0.396 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.