Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7725 | 23398;23399;23400 | chr2:178720589;178720588;178720587 | chr2:179585316;179585315;179585314 |
N2AB | 7408 | 22447;22448;22449 | chr2:178720589;178720588;178720587 | chr2:179585316;179585315;179585314 |
N2A | 6481 | 19666;19667;19668 | chr2:178720589;178720588;178720587 | chr2:179585316;179585315;179585314 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/M | rs1270184889 | None | 0.81 | N | 0.673 | 0.362 | 0.449669948863 | gnomAD-4.0.0 | 1.59241E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85999E-06 | 0 | 0 |
I/T | None | None | 0.549 | N | 0.669 | 0.423 | 0.631214040921 | gnomAD-4.0.0 | 1.20033E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.31251E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.9119 | likely_pathogenic | 0.9074 | pathogenic | -2.541 | Highly Destabilizing | 0.009 | N | 0.405 | neutral | None | None | None | None | N |
I/C | 0.951 | likely_pathogenic | 0.9502 | pathogenic | -1.959 | Destabilizing | 0.992 | D | 0.739 | prob.delet. | None | None | None | None | N |
I/D | 0.9972 | likely_pathogenic | 0.9967 | pathogenic | -2.801 | Highly Destabilizing | 0.92 | D | 0.813 | deleterious | None | None | None | None | N |
I/E | 0.9937 | likely_pathogenic | 0.993 | pathogenic | -2.545 | Highly Destabilizing | 0.92 | D | 0.795 | deleterious | None | None | None | None | N |
I/F | 0.4218 | ambiguous | 0.4062 | ambiguous | -1.458 | Destabilizing | 0.681 | D | 0.703 | prob.neutral | N | 0.498200396 | None | None | N |
I/G | 0.9857 | likely_pathogenic | 0.9837 | pathogenic | -3.089 | Highly Destabilizing | 0.617 | D | 0.761 | deleterious | None | None | None | None | N |
I/H | 0.9859 | likely_pathogenic | 0.9851 | pathogenic | -2.575 | Highly Destabilizing | 0.992 | D | 0.785 | deleterious | None | None | None | None | N |
I/K | 0.9835 | likely_pathogenic | 0.9817 | pathogenic | -1.662 | Destabilizing | 0.92 | D | 0.785 | deleterious | None | None | None | None | N |
I/L | 0.1259 | likely_benign | 0.1162 | benign | -0.931 | Destabilizing | 0.001 | N | 0.187 | neutral | N | 0.444539269 | None | None | N |
I/M | 0.2155 | likely_benign | 0.2043 | benign | -1.171 | Destabilizing | 0.81 | D | 0.673 | neutral | N | 0.501842617 | None | None | N |
I/N | 0.9575 | likely_pathogenic | 0.9477 | pathogenic | -2.098 | Highly Destabilizing | 0.963 | D | 0.813 | deleterious | N | 0.502349596 | None | None | N |
I/P | 0.9932 | likely_pathogenic | 0.9923 | pathogenic | -1.452 | Destabilizing | 0.92 | D | 0.813 | deleterious | None | None | None | None | N |
I/Q | 0.9858 | likely_pathogenic | 0.9846 | pathogenic | -1.897 | Destabilizing | 0.972 | D | 0.813 | deleterious | None | None | None | None | N |
I/R | 0.9765 | likely_pathogenic | 0.9746 | pathogenic | -1.564 | Destabilizing | 0.92 | D | 0.814 | deleterious | None | None | None | None | N |
I/S | 0.959 | likely_pathogenic | 0.9539 | pathogenic | -2.789 | Highly Destabilizing | 0.379 | N | 0.713 | prob.delet. | N | 0.479961352 | None | None | N |
I/T | 0.913 | likely_pathogenic | 0.9057 | pathogenic | -2.383 | Highly Destabilizing | 0.549 | D | 0.669 | neutral | N | 0.496429527 | None | None | N |
I/V | 0.139 | likely_benign | 0.1357 | benign | -1.452 | Destabilizing | 0.007 | N | 0.169 | neutral | N | 0.363757752 | None | None | N |
I/W | 0.9815 | likely_pathogenic | 0.9803 | pathogenic | -1.792 | Destabilizing | 0.992 | D | 0.771 | deleterious | None | None | None | None | N |
I/Y | 0.9042 | likely_pathogenic | 0.8925 | pathogenic | -1.549 | Destabilizing | 0.92 | D | 0.777 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.