Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7728 | 23407;23408;23409 | chr2:178720580;178720579;178720578 | chr2:179585307;179585306;179585305 |
N2AB | 7411 | 22456;22457;22458 | chr2:178720580;178720579;178720578 | chr2:179585307;179585306;179585305 |
N2A | 6484 | 19675;19676;19677 | chr2:178720580;178720579;178720578 | chr2:179585307;179585306;179585305 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | rs760839592 | -0.29 | 0.847 | N | 0.551 | 0.217 | 0.281381271821 | gnomAD-2.1.1 | 8.07E-06 | None | None | None | None | I | None | 0 | 5.81E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
T/A | rs760839592 | -0.29 | 0.847 | N | 0.551 | 0.217 | 0.281381271821 | gnomAD-4.0.0 | 4.77692E-06 | None | None | None | None | I | None | 0 | 6.86342E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.2762 | likely_benign | 0.2843 | benign | -0.441 | Destabilizing | 0.847 | D | 0.551 | neutral | N | 0.490730132 | None | None | I |
T/C | 0.8635 | likely_pathogenic | 0.8791 | pathogenic | -0.527 | Destabilizing | 1.0 | D | 0.687 | prob.neutral | None | None | None | None | I |
T/D | 0.6299 | likely_pathogenic | 0.6202 | pathogenic | 0.103 | Stabilizing | 0.997 | D | 0.639 | neutral | None | None | None | None | I |
T/E | 0.6171 | likely_pathogenic | 0.6308 | pathogenic | 0.093 | Stabilizing | 0.999 | D | 0.638 | neutral | None | None | None | None | I |
T/F | 0.5865 | likely_pathogenic | 0.6086 | pathogenic | -0.795 | Destabilizing | 1.0 | D | 0.748 | deleterious | None | None | None | None | I |
T/G | 0.6554 | likely_pathogenic | 0.6383 | pathogenic | -0.624 | Destabilizing | 0.999 | D | 0.644 | neutral | None | None | None | None | I |
T/H | 0.5632 | ambiguous | 0.5849 | pathogenic | -0.673 | Destabilizing | 1.0 | D | 0.736 | prob.delet. | None | None | None | None | I |
T/I | 0.539 | ambiguous | 0.6046 | pathogenic | -0.061 | Destabilizing | 1.0 | D | 0.703 | prob.neutral | N | 0.505046224 | None | None | I |
T/K | 0.6144 | likely_pathogenic | 0.6518 | pathogenic | -0.394 | Destabilizing | 0.999 | D | 0.645 | neutral | None | None | None | None | I |
T/L | 0.2839 | likely_benign | 0.3004 | benign | -0.061 | Destabilizing | 0.999 | D | 0.653 | neutral | None | None | None | None | I |
T/M | 0.1777 | likely_benign | 0.1874 | benign | -0.293 | Destabilizing | 1.0 | D | 0.699 | prob.neutral | None | None | None | None | I |
T/N | 0.23 | likely_benign | 0.2332 | benign | -0.414 | Destabilizing | 0.997 | D | 0.693 | prob.neutral | N | 0.475376678 | None | None | I |
T/P | 0.6019 | likely_pathogenic | 0.6116 | pathogenic | -0.158 | Destabilizing | 0.999 | D | 0.692 | prob.neutral | N | 0.489215183 | None | None | I |
T/Q | 0.5212 | ambiguous | 0.5452 | ambiguous | -0.486 | Destabilizing | 0.999 | D | 0.698 | prob.neutral | None | None | None | None | I |
T/R | 0.6017 | likely_pathogenic | 0.6299 | pathogenic | -0.13 | Destabilizing | 1.0 | D | 0.687 | prob.neutral | None | None | None | None | I |
T/S | 0.1685 | likely_benign | 0.1463 | benign | -0.628 | Destabilizing | 0.51 | D | 0.407 | neutral | N | 0.437223721 | None | None | I |
T/V | 0.4414 | ambiguous | 0.4968 | ambiguous | -0.158 | Destabilizing | 0.999 | D | 0.663 | neutral | None | None | None | None | I |
T/W | 0.8726 | likely_pathogenic | 0.8735 | pathogenic | -0.869 | Destabilizing | 1.0 | D | 0.77 | deleterious | None | None | None | None | I |
T/Y | 0.6081 | likely_pathogenic | 0.6295 | pathogenic | -0.549 | Destabilizing | 1.0 | D | 0.745 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.