Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7736 | 23431;23432;23433 | chr2:178720556;178720555;178720554 | chr2:179585283;179585282;179585281 |
N2AB | 7419 | 22480;22481;22482 | chr2:178720556;178720555;178720554 | chr2:179585283;179585282;179585281 |
N2A | 6492 | 19699;19700;19701 | chr2:178720556;178720555;178720554 | chr2:179585283;179585282;179585281 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/D | None | None | 0.351 | N | 0.593 | 0.248 | 0.611053723974 | gnomAD-4.0.0 | 1.59208E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85961E-06 | 0 | 0 |
V/F | rs770301886 | -1.303 | None | N | 0.214 | 0.287 | 0.395745362164 | gnomAD-2.1.1 | 1.21E-05 | None | None | None | None | N | None | 0 | 5.81E-05 | None | 0 | 0 | None | 0 | None | 0 | 8.91E-06 | 0 |
V/F | rs770301886 | -1.303 | None | N | 0.214 | 0.287 | 0.395745362164 | gnomAD-4.0.0 | 7.96062E-06 | None | None | None | None | N | None | 0 | 4.57477E-05 | None | 0 | 0 | None | 0 | 0 | 8.57913E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.2516 | likely_benign | 0.2702 | benign | -1.827 | Destabilizing | 0.183 | N | 0.332 | neutral | N | 0.399200398 | None | None | N |
V/C | 0.7109 | likely_pathogenic | 0.7065 | pathogenic | -1.171 | Destabilizing | 0.94 | D | 0.538 | neutral | None | None | None | None | N |
V/D | 0.4842 | ambiguous | 0.5397 | ambiguous | -2.446 | Highly Destabilizing | 0.351 | N | 0.593 | neutral | N | 0.463019803 | None | None | N |
V/E | 0.3284 | likely_benign | 0.3758 | ambiguous | -2.314 | Highly Destabilizing | 0.129 | N | 0.511 | neutral | None | None | None | None | N |
V/F | 0.082 | likely_benign | 0.0714 | benign | -1.191 | Destabilizing | None | N | 0.214 | neutral | N | 0.315907011 | None | None | N |
V/G | 0.2543 | likely_benign | 0.2774 | benign | -2.278 | Highly Destabilizing | 0.523 | D | 0.565 | neutral | N | 0.481605564 | None | None | N |
V/H | 0.4956 | ambiguous | 0.5209 | ambiguous | -2.158 | Highly Destabilizing | 0.002 | N | 0.438 | neutral | None | None | None | None | N |
V/I | 0.0799 | likely_benign | 0.0774 | benign | -0.608 | Destabilizing | 0.001 | N | 0.175 | neutral | N | 0.414841854 | None | None | N |
V/K | 0.5317 | ambiguous | 0.5853 | pathogenic | -1.652 | Destabilizing | 0.264 | N | 0.559 | neutral | None | None | None | None | N |
V/L | 0.1403 | likely_benign | 0.1439 | benign | -0.608 | Destabilizing | 0.017 | N | 0.311 | neutral | N | 0.355926836 | None | None | N |
V/M | 0.1003 | likely_benign | 0.0975 | benign | -0.419 | Destabilizing | 0.716 | D | 0.52 | neutral | None | None | None | None | N |
V/N | 0.2925 | likely_benign | 0.3128 | benign | -1.721 | Destabilizing | 0.418 | N | 0.618 | neutral | None | None | None | None | N |
V/P | 0.9826 | likely_pathogenic | 0.9849 | pathogenic | -0.985 | Destabilizing | 0.94 | D | 0.635 | neutral | None | None | None | None | N |
V/Q | 0.3092 | likely_benign | 0.3359 | benign | -1.691 | Destabilizing | 0.027 | N | 0.401 | neutral | None | None | None | None | N |
V/R | 0.4627 | ambiguous | 0.5131 | ambiguous | -1.331 | Destabilizing | 0.418 | N | 0.626 | neutral | None | None | None | None | N |
V/S | 0.2228 | likely_benign | 0.2398 | benign | -2.23 | Highly Destabilizing | 0.418 | N | 0.529 | neutral | None | None | None | None | N |
V/T | 0.2111 | likely_benign | 0.2245 | benign | -1.983 | Destabilizing | 0.228 | N | 0.391 | neutral | None | None | None | None | N |
V/W | 0.6383 | likely_pathogenic | 0.6116 | pathogenic | -1.736 | Destabilizing | 0.94 | D | 0.603 | neutral | None | None | None | None | N |
V/Y | 0.3243 | likely_benign | 0.3078 | benign | -1.353 | Destabilizing | 0.004 | N | 0.207 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.