Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7750 | 23473;23474;23475 | chr2:178720514;178720513;178720512 | chr2:179585241;179585240;179585239 |
N2AB | 7433 | 22522;22523;22524 | chr2:178720514;178720513;178720512 | chr2:179585241;179585240;179585239 |
N2A | 6506 | 19741;19742;19743 | chr2:178720514;178720513;178720512 | chr2:179585241;179585240;179585239 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/V | None | None | None | N | 0.125 | 0.145 | 0.349204839081 | gnomAD-4.0.0 | 1.59171E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.8592E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.5938 | likely_pathogenic | 0.6368 | pathogenic | -2.261 | Highly Destabilizing | 0.291 | N | 0.387 | neutral | None | None | None | None | N |
I/C | 0.8105 | likely_pathogenic | 0.8286 | pathogenic | -1.644 | Destabilizing | 0.982 | D | 0.556 | neutral | None | None | None | None | N |
I/D | 0.9275 | likely_pathogenic | 0.9407 | pathogenic | -1.767 | Destabilizing | 0.934 | D | 0.644 | neutral | None | None | None | None | N |
I/E | 0.8335 | likely_pathogenic | 0.851 | pathogenic | -1.657 | Destabilizing | 0.913 | D | 0.627 | neutral | None | None | None | None | N |
I/F | 0.2372 | likely_benign | 0.2789 | benign | -1.497 | Destabilizing | 0.677 | D | 0.507 | neutral | N | 0.519015598 | None | None | N |
I/G | 0.8449 | likely_pathogenic | 0.8734 | pathogenic | -2.712 | Highly Destabilizing | 0.934 | D | 0.607 | neutral | None | None | None | None | N |
I/H | 0.7706 | likely_pathogenic | 0.792 | pathogenic | -1.945 | Destabilizing | 0.985 | D | 0.635 | neutral | None | None | None | None | N |
I/K | 0.6984 | likely_pathogenic | 0.6977 | pathogenic | -1.546 | Destabilizing | 0.294 | N | 0.631 | neutral | None | None | None | None | N |
I/L | 0.1489 | likely_benign | 0.1591 | benign | -1.024 | Destabilizing | 0.002 | N | 0.322 | neutral | N | 0.492405 | None | None | N |
I/M | 0.109 | likely_benign | 0.1145 | benign | -0.908 | Destabilizing | 0.386 | N | 0.527 | neutral | D | 0.523709342 | None | None | N |
I/N | 0.5092 | ambiguous | 0.5352 | ambiguous | -1.548 | Destabilizing | 0.97 | D | 0.645 | neutral | N | 0.511677986 | None | None | N |
I/P | 0.9336 | likely_pathogenic | 0.9503 | pathogenic | -1.41 | Destabilizing | 0.977 | D | 0.64 | neutral | None | None | None | None | N |
I/Q | 0.677 | likely_pathogenic | 0.6979 | pathogenic | -1.594 | Destabilizing | 0.947 | D | 0.654 | neutral | None | None | None | None | N |
I/R | 0.6323 | likely_pathogenic | 0.6427 | pathogenic | -1.085 | Destabilizing | 0.849 | D | 0.657 | neutral | None | None | None | None | N |
I/S | 0.575 | likely_pathogenic | 0.6112 | pathogenic | -2.328 | Highly Destabilizing | 0.6 | D | 0.545 | neutral | N | 0.506967498 | None | None | N |
I/T | 0.4581 | ambiguous | 0.4854 | ambiguous | -2.078 | Highly Destabilizing | 0.311 | N | 0.471 | neutral | D | 0.523672057 | None | None | N |
I/V | 0.0873 | likely_benign | 0.0967 | benign | -1.41 | Destabilizing | None | N | 0.125 | neutral | N | 0.492786215 | None | None | N |
I/W | 0.8473 | likely_pathogenic | 0.8734 | pathogenic | -1.66 | Destabilizing | 0.996 | D | 0.675 | prob.neutral | None | None | None | None | N |
I/Y | 0.6267 | likely_pathogenic | 0.6385 | pathogenic | -1.42 | Destabilizing | 0.397 | N | 0.585 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.