Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7755 | 23488;23489;23490 | chr2:178720499;178720498;178720497 | chr2:179585226;179585225;179585224 |
N2AB | 7438 | 22537;22538;22539 | chr2:178720499;178720498;178720497 | chr2:179585226;179585225;179585224 |
N2A | 6511 | 19756;19757;19758 | chr2:178720499;178720498;178720497 | chr2:179585226;179585225;179585224 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/S | None | None | 0.002 | N | 0.247 | 0.302 | 0.441017621159 | gnomAD-4.0.0 | 6.84277E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99549E-07 | 0 | 0 |
F/Y | None | None | 0.51 | N | 0.358 | 0.112 | 0.423360453849 | gnomAD-4.0.0 | 6.84277E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99549E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/A | 0.2382 | likely_benign | 0.259 | benign | -2.141 | Highly Destabilizing | 0.098 | N | 0.341 | neutral | None | None | None | None | N |
F/C | 0.2215 | likely_benign | 0.2553 | benign | -1.077 | Destabilizing | 0.952 | D | 0.441 | neutral | N | 0.474029883 | None | None | N |
F/D | 0.4463 | ambiguous | 0.4888 | ambiguous | -0.894 | Destabilizing | 0.199 | N | 0.463 | neutral | None | None | None | None | N |
F/E | 0.5801 | likely_pathogenic | 0.6205 | pathogenic | -0.794 | Destabilizing | 0.13 | N | 0.443 | neutral | None | None | None | None | N |
F/G | 0.3902 | ambiguous | 0.4141 | ambiguous | -2.482 | Highly Destabilizing | 0.001 | N | 0.276 | neutral | None | None | None | None | N |
F/H | 0.3127 | likely_benign | 0.357 | ambiguous | -0.79 | Destabilizing | 0.72 | D | 0.441 | neutral | None | None | None | None | N |
F/I | 0.1735 | likely_benign | 0.1869 | benign | -1.107 | Destabilizing | 0.433 | N | 0.296 | neutral | N | 0.465063683 | None | None | N |
F/K | 0.5553 | ambiguous | 0.607 | pathogenic | -1.235 | Destabilizing | 0.171 | N | 0.441 | neutral | None | None | None | None | N |
F/L | 0.6478 | likely_pathogenic | 0.6866 | pathogenic | -1.107 | Destabilizing | 0.135 | N | 0.236 | neutral | N | 0.486169674 | None | None | N |
F/M | 0.349 | ambiguous | 0.3655 | ambiguous | -0.805 | Destabilizing | 0.503 | D | 0.387 | neutral | None | None | None | None | N |
F/N | 0.2887 | likely_benign | 0.3204 | benign | -1.312 | Destabilizing | 0.007 | N | 0.301 | neutral | None | None | None | None | N |
F/P | 0.8327 | likely_pathogenic | 0.8749 | pathogenic | -1.446 | Destabilizing | 0.71 | D | 0.494 | neutral | None | None | None | None | N |
F/Q | 0.4619 | ambiguous | 0.5079 | ambiguous | -1.337 | Destabilizing | 0.423 | N | 0.495 | neutral | None | None | None | None | N |
F/R | 0.4241 | ambiguous | 0.4679 | ambiguous | -0.663 | Destabilizing | 0.333 | N | 0.489 | neutral | None | None | None | None | N |
F/S | 0.1398 | likely_benign | 0.1529 | benign | -2.09 | Highly Destabilizing | 0.002 | N | 0.247 | neutral | N | 0.390333851 | None | None | N |
F/T | 0.1874 | likely_benign | 0.207 | benign | -1.889 | Destabilizing | 0.199 | N | 0.407 | neutral | None | None | None | None | N |
F/V | 0.1603 | likely_benign | 0.1748 | benign | -1.446 | Destabilizing | 0.101 | N | 0.373 | neutral | N | 0.460137866 | None | None | N |
F/W | 0.3816 | ambiguous | 0.4169 | ambiguous | -0.387 | Destabilizing | 0.982 | D | 0.429 | neutral | None | None | None | None | N |
F/Y | 0.1009 | likely_benign | 0.1085 | benign | -0.62 | Destabilizing | 0.51 | D | 0.358 | neutral | N | 0.462466095 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.