Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7763 | 23512;23513;23514 | chr2:178720475;178720474;178720473 | chr2:179585202;179585201;179585200 |
N2AB | 7446 | 22561;22562;22563 | chr2:178720475;178720474;178720473 | chr2:179585202;179585201;179585200 |
N2A | 6519 | 19780;19781;19782 | chr2:178720475;178720474;178720473 | chr2:179585202;179585201;179585200 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/S | None | None | None | N | 0.069 | 0.057 | 0.0297737177859 | gnomAD-4.0.0 | 2.40065E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.62501E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.2192 | likely_benign | 0.2151 | benign | -0.652 | Destabilizing | 0.002 | N | 0.297 | neutral | None | None | None | None | N |
N/C | 0.3191 | likely_benign | 0.2889 | benign | 0.168 | Stabilizing | 0.867 | D | 0.318 | neutral | None | None | None | None | N |
N/D | 0.2064 | likely_benign | 0.1809 | benign | -0.501 | Destabilizing | 0.017 | N | 0.206 | neutral | N | 0.47233272 | None | None | N |
N/E | 0.5373 | ambiguous | 0.501 | ambiguous | -0.469 | Destabilizing | 0.016 | N | 0.217 | neutral | None | None | None | None | N |
N/F | 0.5072 | ambiguous | 0.4623 | ambiguous | -0.707 | Destabilizing | 0.502 | D | 0.375 | neutral | None | None | None | None | N |
N/G | 0.2187 | likely_benign | 0.2262 | benign | -0.922 | Destabilizing | 0.038 | N | 0.253 | neutral | None | None | None | None | N |
N/H | 0.0893 | likely_benign | 0.078 | benign | -0.852 | Destabilizing | 0.001 | N | 0.199 | neutral | N | 0.50887231 | None | None | N |
N/I | 0.3552 | ambiguous | 0.3137 | benign | 0.001 | Stabilizing | 0.366 | N | 0.387 | neutral | N | 0.472460605 | None | None | N |
N/K | 0.3872 | ambiguous | 0.3505 | ambiguous | -0.125 | Destabilizing | 0.001 | N | 0.079 | neutral | N | 0.431006172 | None | None | N |
N/L | 0.2479 | likely_benign | 0.2288 | benign | 0.001 | Stabilizing | 0.097 | N | 0.382 | neutral | None | None | None | None | N |
N/M | 0.3467 | ambiguous | 0.3248 | benign | 0.606 | Stabilizing | 0.699 | D | 0.33 | neutral | None | None | None | None | N |
N/P | 0.7899 | likely_pathogenic | 0.7526 | pathogenic | -0.188 | Destabilizing | 0.141 | N | 0.385 | neutral | None | None | None | None | N |
N/Q | 0.2963 | likely_benign | 0.2863 | benign | -0.802 | Destabilizing | 0.097 | N | 0.255 | neutral | None | None | None | None | N |
N/R | 0.4183 | ambiguous | 0.3836 | ambiguous | -0.051 | Destabilizing | 0.001 | N | 0.151 | neutral | None | None | None | None | N |
N/S | 0.0749 | likely_benign | 0.0749 | benign | -0.612 | Destabilizing | None | N | 0.069 | neutral | N | 0.430832814 | None | None | N |
N/T | 0.1431 | likely_benign | 0.1424 | benign | -0.409 | Destabilizing | 0.006 | N | 0.212 | neutral | N | 0.50887231 | None | None | N |
N/V | 0.3457 | ambiguous | 0.3197 | benign | -0.188 | Destabilizing | 0.009 | N | 0.421 | neutral | None | None | None | None | N |
N/W | 0.7882 | likely_pathogenic | 0.7381 | pathogenic | -0.524 | Destabilizing | 0.002 | N | 0.251 | neutral | None | None | None | None | N |
N/Y | 0.185 | likely_benign | 0.1562 | benign | -0.298 | Destabilizing | 0.276 | N | 0.383 | neutral | N | 0.486930782 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.