Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7765 | 23518;23519;23520 | chr2:178720469;178720468;178720467 | chr2:179585196;179585195;179585194 |
N2AB | 7448 | 22567;22568;22569 | chr2:178720469;178720468;178720467 | chr2:179585196;179585195;179585194 |
N2A | 6521 | 19786;19787;19788 | chr2:178720469;178720468;178720467 | chr2:179585196;179585195;179585194 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | rs774259283 | -0.356 | 0.001 | N | 0.121 | 0.107 | 0.0482279557977 | gnomAD-2.1.1 | 7.14E-06 | None | None | None | None | N | None | 8.27E-05 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
E/D | rs774259283 | -0.356 | 0.001 | N | 0.121 | 0.107 | 0.0482279557977 | gnomAD-3.1.2 | 1.97E-05 | None | None | None | None | N | None | 7.24E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
E/D | rs774259283 | -0.356 | 0.001 | N | 0.121 | 0.107 | 0.0482279557977 | gnomAD-4.0.0 | 3.09867E-06 | None | None | None | None | N | None | 5.33988E-05 | 0 | None | 0 | 0 | None | 1.56196E-05 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.2478 | likely_benign | 0.3004 | benign | -0.756 | Destabilizing | 0.013 | N | 0.151 | neutral | N | 0.513396348 | None | None | N |
E/C | 0.9183 | likely_pathogenic | 0.94 | pathogenic | -0.227 | Destabilizing | 0.991 | D | 0.375 | neutral | None | None | None | None | N |
E/D | 0.098 | likely_benign | 0.1137 | benign | -0.806 | Destabilizing | 0.001 | N | 0.121 | neutral | N | 0.4540414 | None | None | N |
E/F | 0.8424 | likely_pathogenic | 0.8781 | pathogenic | -0.284 | Destabilizing | 0.965 | D | 0.389 | neutral | None | None | None | None | N |
E/G | 0.2431 | likely_benign | 0.2979 | benign | -1.072 | Destabilizing | 0.001 | N | 0.145 | neutral | N | 0.515340575 | None | None | N |
E/H | 0.6362 | likely_pathogenic | 0.6861 | pathogenic | -0.347 | Destabilizing | 0.965 | D | 0.333 | neutral | None | None | None | None | N |
E/I | 0.5766 | likely_pathogenic | 0.6206 | pathogenic | 0.091 | Stabilizing | 0.901 | D | 0.414 | neutral | None | None | None | None | N |
E/K | 0.3876 | ambiguous | 0.4294 | ambiguous | -0.101 | Destabilizing | 0.166 | N | 0.249 | neutral | N | 0.468277347 | None | None | N |
E/L | 0.5291 | ambiguous | 0.5721 | pathogenic | 0.091 | Stabilizing | 0.561 | D | 0.416 | neutral | None | None | None | None | N |
E/M | 0.6284 | likely_pathogenic | 0.6706 | pathogenic | 0.469 | Stabilizing | 0.991 | D | 0.353 | neutral | None | None | None | None | N |
E/N | 0.3198 | likely_benign | 0.3881 | ambiguous | -0.667 | Destabilizing | 0.39 | N | 0.213 | neutral | None | None | None | None | N |
E/P | 0.9114 | likely_pathogenic | 0.9404 | pathogenic | -0.17 | Destabilizing | 0.901 | D | 0.367 | neutral | None | None | None | None | N |
E/Q | 0.234 | likely_benign | 0.2566 | benign | -0.545 | Destabilizing | 0.491 | N | 0.334 | neutral | N | 0.484516236 | None | None | N |
E/R | 0.5216 | ambiguous | 0.5616 | ambiguous | 0.162 | Stabilizing | 0.004 | N | 0.215 | neutral | None | None | None | None | N |
E/S | 0.2774 | likely_benign | 0.3351 | benign | -0.881 | Destabilizing | 0.209 | N | 0.245 | neutral | None | None | None | None | N |
E/T | 0.3282 | likely_benign | 0.3835 | ambiguous | -0.608 | Destabilizing | 0.561 | D | 0.325 | neutral | None | None | None | None | N |
E/V | 0.3486 | ambiguous | 0.3822 | ambiguous | -0.17 | Destabilizing | 0.491 | N | 0.4 | neutral | N | 0.491444995 | None | None | N |
E/W | 0.9567 | likely_pathogenic | 0.9694 | pathogenic | -0.003 | Destabilizing | 0.991 | D | 0.437 | neutral | None | None | None | None | N |
E/Y | 0.7762 | likely_pathogenic | 0.8271 | pathogenic | -0.011 | Destabilizing | 0.965 | D | 0.363 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.