Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7766 | 23521;23522;23523 | chr2:178720466;178720465;178720464 | chr2:179585193;179585192;179585191 |
N2AB | 7449 | 22570;22571;22572 | chr2:178720466;178720465;178720464 | chr2:179585193;179585192;179585191 |
N2A | 6522 | 19789;19790;19791 | chr2:178720466;178720465;178720464 | chr2:179585193;179585192;179585191 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/D | None | None | 0.032 | N | 0.293 | 0.192 | None | gnomAD-4.0.0 | 2.05281E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99551E-07 | 0 | 3.31367E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.5493 | ambiguous | 0.605 | pathogenic | -0.896 | Destabilizing | 0.998 | D | 0.35 | neutral | None | None | None | None | N |
A/D | 0.2462 | likely_benign | 0.3092 | benign | -0.325 | Destabilizing | 0.032 | N | 0.293 | neutral | N | 0.492457276 | None | None | N |
A/E | 0.2731 | likely_benign | 0.3158 | benign | -0.392 | Destabilizing | 0.754 | D | 0.368 | neutral | None | None | None | None | N |
A/F | 0.2577 | likely_benign | 0.3008 | benign | -0.774 | Destabilizing | 0.978 | D | 0.511 | neutral | None | None | None | None | N |
A/G | 0.1037 | likely_benign | 0.1221 | benign | -0.66 | Destabilizing | 0.698 | D | 0.343 | neutral | N | 0.501346118 | None | None | N |
A/H | 0.4303 | ambiguous | 0.4912 | ambiguous | -0.479 | Destabilizing | 0.998 | D | 0.522 | neutral | None | None | None | None | N |
A/I | 0.1622 | likely_benign | 0.1822 | benign | -0.247 | Destabilizing | 0.956 | D | 0.365 | neutral | None | None | None | None | N |
A/K | 0.4974 | ambiguous | 0.5576 | ambiguous | -0.701 | Destabilizing | 0.86 | D | 0.339 | neutral | None | None | None | None | N |
A/L | 0.1333 | likely_benign | 0.1519 | benign | -0.247 | Destabilizing | 0.86 | D | 0.354 | neutral | None | None | None | None | N |
A/M | 0.1668 | likely_benign | 0.1896 | benign | -0.52 | Destabilizing | 0.998 | D | 0.403 | neutral | None | None | None | None | N |
A/N | 0.16 | likely_benign | 0.1963 | benign | -0.513 | Destabilizing | 0.915 | D | 0.449 | neutral | None | None | None | None | N |
A/P | 0.104 | likely_benign | 0.1201 | benign | -0.295 | Destabilizing | 0.97 | D | 0.369 | neutral | N | 0.446548841 | None | None | N |
A/Q | 0.3241 | likely_benign | 0.3716 | ambiguous | -0.646 | Destabilizing | 0.956 | D | 0.354 | neutral | None | None | None | None | N |
A/R | 0.5118 | ambiguous | 0.5666 | pathogenic | -0.338 | Destabilizing | 0.956 | D | 0.361 | neutral | None | None | None | None | N |
A/S | 0.0776 | likely_benign | 0.0877 | benign | -0.847 | Destabilizing | 0.058 | N | 0.227 | neutral | N | 0.446780914 | None | None | N |
A/T | 0.0762 | likely_benign | 0.0824 | benign | -0.801 | Destabilizing | 0.058 | N | 0.287 | neutral | N | 0.467790904 | None | None | N |
A/V | 0.0951 | likely_benign | 0.1041 | benign | -0.295 | Destabilizing | 0.822 | D | 0.328 | neutral | N | 0.455515041 | None | None | N |
A/W | 0.6771 | likely_pathogenic | 0.7259 | pathogenic | -0.962 | Destabilizing | 0.998 | D | 0.649 | neutral | None | None | None | None | N |
A/Y | 0.3892 | ambiguous | 0.4377 | ambiguous | -0.592 | Destabilizing | 0.993 | D | 0.503 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.