Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7767 | 23524;23525;23526 | chr2:178720463;178720462;178720461 | chr2:179585190;179585189;179585188 |
N2AB | 7450 | 22573;22574;22575 | chr2:178720463;178720462;178720461 | chr2:179585190;179585189;179585188 |
N2A | 6523 | 19792;19793;19794 | chr2:178720463;178720462;178720461 | chr2:179585190;179585189;179585188 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/F | None | None | 0.171 | N | 0.405 | 0.209 | 0.406668915854 | gnomAD-4.0.0 | 1.59163E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85909E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0542 | likely_benign | 0.055 | benign | -0.176 | Destabilizing | None | N | 0.093 | neutral | N | 0.435681273 | None | None | N |
S/C | 0.1721 | likely_benign | 0.1808 | benign | -0.317 | Destabilizing | 0.295 | N | 0.348 | neutral | N | 0.507806514 | None | None | N |
S/D | 0.394 | ambiguous | 0.537 | ambiguous | 0.174 | Stabilizing | 0.038 | N | 0.203 | neutral | None | None | None | None | N |
S/E | 0.4823 | ambiguous | 0.6197 | pathogenic | 0.084 | Stabilizing | 0.016 | N | 0.213 | neutral | None | None | None | None | N |
S/F | 0.1837 | likely_benign | 0.2161 | benign | -0.829 | Destabilizing | 0.171 | N | 0.405 | neutral | N | 0.475459118 | None | None | N |
S/G | 0.0755 | likely_benign | 0.0897 | benign | -0.27 | Destabilizing | 0.016 | N | 0.24 | neutral | None | None | None | None | N |
S/H | 0.3159 | likely_benign | 0.4221 | ambiguous | -0.633 | Destabilizing | 0.356 | N | 0.363 | neutral | None | None | None | None | N |
S/I | 0.1326 | likely_benign | 0.1568 | benign | -0.064 | Destabilizing | 0.038 | N | 0.412 | neutral | None | None | None | None | N |
S/K | 0.6 | likely_pathogenic | 0.7519 | pathogenic | -0.374 | Destabilizing | 0.016 | N | 0.206 | neutral | None | None | None | None | N |
S/L | 0.0776 | likely_benign | 0.0861 | benign | -0.064 | Destabilizing | None | N | 0.247 | neutral | None | None | None | None | N |
S/M | 0.1379 | likely_benign | 0.1624 | benign | -0.047 | Destabilizing | 0.214 | N | 0.363 | neutral | None | None | None | None | N |
S/N | 0.1102 | likely_benign | 0.146 | benign | -0.173 | Destabilizing | 0.001 | N | 0.191 | neutral | None | None | None | None | N |
S/P | 0.1019 | likely_benign | 0.1244 | benign | -0.073 | Destabilizing | None | N | 0.212 | neutral | N | 0.469445184 | None | None | N |
S/Q | 0.3533 | ambiguous | 0.4664 | ambiguous | -0.367 | Destabilizing | 0.001 | N | 0.195 | neutral | None | None | None | None | N |
S/R | 0.5912 | likely_pathogenic | 0.7334 | pathogenic | -0.14 | Destabilizing | 0.038 | N | 0.423 | neutral | None | None | None | None | N |
S/T | 0.073 | likely_benign | 0.0775 | benign | -0.254 | Destabilizing | 0.001 | N | 0.145 | neutral | N | 0.484512583 | None | None | N |
S/V | 0.1223 | likely_benign | 0.1382 | benign | -0.073 | Destabilizing | 0.016 | N | 0.331 | neutral | None | None | None | None | N |
S/W | 0.3756 | ambiguous | 0.4185 | ambiguous | -0.905 | Destabilizing | 0.864 | D | 0.402 | neutral | None | None | None | None | N |
S/Y | 0.2458 | likely_benign | 0.2742 | benign | -0.585 | Destabilizing | 0.295 | N | 0.399 | neutral | N | 0.481054979 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.