Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7777 | 23554;23555;23556 | chr2:178720433;178720432;178720431 | chr2:179585160;179585159;179585158 |
N2AB | 7460 | 22603;22604;22605 | chr2:178720433;178720432;178720431 | chr2:179585160;179585159;179585158 |
N2A | 6533 | 19822;19823;19824 | chr2:178720433;178720432;178720431 | chr2:179585160;179585159;179585158 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | None | None | None | N | 0.099 | 0.118 | 0.0884992946249 | gnomAD-4.0.0 | 1.59171E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43336E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0805 | likely_benign | 0.0802 | benign | -0.919 | Destabilizing | None | N | 0.099 | neutral | N | 0.518399523 | None | None | N |
T/C | 0.4485 | ambiguous | 0.4424 | ambiguous | -0.736 | Destabilizing | 0.356 | N | 0.499 | neutral | None | None | None | None | N |
T/D | 0.5439 | ambiguous | 0.5491 | ambiguous | -0.934 | Destabilizing | 0.072 | N | 0.463 | neutral | None | None | None | None | N |
T/E | 0.4003 | ambiguous | 0.3957 | ambiguous | -0.922 | Destabilizing | 0.072 | N | 0.461 | neutral | None | None | None | None | N |
T/F | 0.2288 | likely_benign | 0.2305 | benign | -1.049 | Destabilizing | 0.214 | N | 0.505 | neutral | None | None | None | None | N |
T/G | 0.2538 | likely_benign | 0.2647 | benign | -1.174 | Destabilizing | 0.016 | N | 0.527 | neutral | None | None | None | None | N |
T/H | 0.3036 | likely_benign | 0.3035 | benign | -1.477 | Destabilizing | 0.628 | D | 0.515 | neutral | None | None | None | None | N |
T/I | 0.1422 | likely_benign | 0.1379 | benign | -0.326 | Destabilizing | 0.012 | N | 0.461 | neutral | N | 0.487395212 | None | None | N |
T/K | 0.2839 | likely_benign | 0.2745 | benign | -0.834 | Destabilizing | 0.072 | N | 0.457 | neutral | None | None | None | None | N |
T/L | 0.1041 | likely_benign | 0.1032 | benign | -0.326 | Destabilizing | 0.002 | N | 0.421 | neutral | None | None | None | None | N |
T/M | 0.0865 | likely_benign | 0.0852 | benign | 0.056 | Stabilizing | 0.007 | N | 0.364 | neutral | None | None | None | None | N |
T/N | 0.1546 | likely_benign | 0.1497 | benign | -0.911 | Destabilizing | 0.055 | N | 0.402 | neutral | N | 0.490825026 | None | None | N |
T/P | 0.777 | likely_pathogenic | 0.7781 | pathogenic | -0.493 | Destabilizing | 0.055 | N | 0.487 | neutral | D | 0.53742879 | None | None | N |
T/Q | 0.2435 | likely_benign | 0.2457 | benign | -1.158 | Destabilizing | 0.136 | N | 0.459 | neutral | None | None | None | None | N |
T/R | 0.2142 | likely_benign | 0.2103 | benign | -0.536 | Destabilizing | 0.072 | N | 0.478 | neutral | None | None | None | None | N |
T/S | 0.1031 | likely_benign | 0.103 | benign | -1.128 | Destabilizing | 0.001 | N | 0.11 | neutral | N | 0.441381534 | None | None | N |
T/V | 0.1051 | likely_benign | 0.1052 | benign | -0.493 | Destabilizing | None | N | 0.149 | neutral | None | None | None | None | N |
T/W | 0.6098 | likely_pathogenic | 0.6152 | pathogenic | -0.982 | Destabilizing | 0.864 | D | 0.497 | neutral | None | None | None | None | N |
T/Y | 0.3247 | likely_benign | 0.3179 | benign | -0.721 | Destabilizing | 0.356 | N | 0.524 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.