Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7778 | 23557;23558;23559 | chr2:178720430;178720429;178720428 | chr2:179585157;179585156;179585155 |
N2AB | 7461 | 22606;22607;22608 | chr2:178720430;178720429;178720428 | chr2:179585157;179585156;179585155 |
N2A | 6534 | 19825;19826;19827 | chr2:178720430;178720429;178720428 | chr2:179585157;179585156;179585155 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/D | rs2078170998 | None | 0.966 | D | 0.609 | 0.427 | 0.294918367191 | gnomAD-4.0.0 | 3.18347E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 5.54631E-05 | None | 0 | 0 | 0 | 0 | 0 |
N/S | None | None | 0.905 | N | 0.56 | 0.484 | 0.219573609325 | gnomAD-4.0.0 | 1.59179E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43349E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.9937 | likely_pathogenic | 0.9946 | pathogenic | -1.012 | Destabilizing | 0.667 | D | 0.734 | prob.delet. | None | None | None | None | I |
N/C | 0.9814 | likely_pathogenic | 0.983 | pathogenic | -0.197 | Destabilizing | 0.999 | D | 0.797 | deleterious | None | None | None | None | I |
N/D | 0.98 | likely_pathogenic | 0.9763 | pathogenic | -0.95 | Destabilizing | 0.966 | D | 0.609 | neutral | D | 0.559500657 | None | None | I |
N/E | 0.9986 | likely_pathogenic | 0.9986 | pathogenic | -0.858 | Destabilizing | 0.977 | D | 0.668 | neutral | None | None | None | None | I |
N/F | 0.9997 | likely_pathogenic | 0.9997 | pathogenic | -0.832 | Destabilizing | 0.993 | D | 0.789 | deleterious | None | None | None | None | I |
N/G | 0.9817 | likely_pathogenic | 0.9844 | pathogenic | -1.332 | Destabilizing | 0.991 | D | 0.549 | neutral | None | None | None | None | I |
N/H | 0.985 | likely_pathogenic | 0.9847 | pathogenic | -1.091 | Destabilizing | 0.987 | D | 0.72 | prob.delet. | D | 0.560768105 | None | None | I |
N/I | 0.9976 | likely_pathogenic | 0.9973 | pathogenic | -0.199 | Destabilizing | 0.987 | D | 0.795 | deleterious | D | 0.561021594 | None | None | I |
N/K | 0.999 | likely_pathogenic | 0.9989 | pathogenic | -0.312 | Destabilizing | 0.998 | D | 0.671 | neutral | D | 0.560261126 | None | None | I |
N/L | 0.9879 | likely_pathogenic | 0.9877 | pathogenic | -0.199 | Destabilizing | 0.981 | D | 0.782 | deleterious | None | None | None | None | I |
N/M | 0.9947 | likely_pathogenic | 0.9947 | pathogenic | 0.319 | Stabilizing | 1.0 | D | 0.795 | deleterious | None | None | None | None | I |
N/P | 0.9986 | likely_pathogenic | 0.9984 | pathogenic | -0.442 | Destabilizing | 0.993 | D | 0.796 | deleterious | None | None | None | None | I |
N/Q | 0.9983 | likely_pathogenic | 0.9984 | pathogenic | -1.013 | Destabilizing | 0.995 | D | 0.727 | prob.delet. | None | None | None | None | I |
N/R | 0.9981 | likely_pathogenic | 0.998 | pathogenic | -0.274 | Destabilizing | 0.998 | D | 0.733 | prob.delet. | None | None | None | None | I |
N/S | 0.6786 | likely_pathogenic | 0.6895 | pathogenic | -0.952 | Destabilizing | 0.905 | D | 0.56 | neutral | N | 0.50680728 | None | None | I |
N/T | 0.9524 | likely_pathogenic | 0.9495 | pathogenic | -0.681 | Destabilizing | 0.936 | D | 0.661 | neutral | D | 0.533256101 | None | None | I |
N/V | 0.9943 | likely_pathogenic | 0.9943 | pathogenic | -0.442 | Destabilizing | 0.894 | D | 0.788 | deleterious | None | None | None | None | I |
N/W | 0.9998 | likely_pathogenic | 0.9998 | pathogenic | -0.569 | Destabilizing | 1.0 | D | 0.796 | deleterious | None | None | None | None | I |
N/Y | 0.9967 | likely_pathogenic | 0.9965 | pathogenic | -0.354 | Destabilizing | 0.296 | N | 0.441 | neutral | D | 0.5494118 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.