Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7779 | 23560;23561;23562 | chr2:178720427;178720426;178720425 | chr2:179585154;179585153;179585152 |
N2AB | 7462 | 22609;22610;22611 | chr2:178720427;178720426;178720425 | chr2:179585154;179585153;179585152 |
N2A | 6535 | 19828;19829;19830 | chr2:178720427;178720426;178720425 | chr2:179585154;179585153;179585152 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | rs1253898130 | None | 0.014 | N | 0.341 | 0.226 | 0.200317383148 | gnomAD-4.0.0 | 3.18402E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 5.54662E-05 | None | 0 | 0 | 0 | 0 | 0 |
E/K | rs1314203498 | None | 0.822 | N | 0.474 | 0.342 | 0.40528724903 | gnomAD-4.0.0 | 6.84315E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99572E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.27 | likely_benign | 0.2411 | benign | -0.027 | Destabilizing | 0.489 | N | 0.481 | neutral | N | 0.484286949 | None | None | I |
E/C | 0.9596 | likely_pathogenic | 0.9575 | pathogenic | -0.258 | Destabilizing | 0.998 | D | 0.628 | neutral | None | None | None | None | I |
E/D | 0.1134 | likely_benign | 0.1122 | benign | -0.453 | Destabilizing | 0.014 | N | 0.341 | neutral | N | 0.484807024 | None | None | I |
E/F | 0.9186 | likely_pathogenic | 0.9116 | pathogenic | -0.12 | Destabilizing | 0.993 | D | 0.573 | neutral | None | None | None | None | I |
E/G | 0.3731 | ambiguous | 0.3407 | ambiguous | -0.118 | Destabilizing | 0.014 | N | 0.336 | neutral | N | 0.503123426 | None | None | I |
E/H | 0.756 | likely_pathogenic | 0.7408 | pathogenic | 0.527 | Stabilizing | 0.998 | D | 0.462 | neutral | None | None | None | None | I |
E/I | 0.562 | ambiguous | 0.5325 | ambiguous | 0.151 | Stabilizing | 0.978 | D | 0.567 | neutral | None | None | None | None | I |
E/K | 0.3911 | ambiguous | 0.3693 | ambiguous | 0.343 | Stabilizing | 0.822 | D | 0.474 | neutral | N | 0.506854378 | None | None | I |
E/L | 0.68 | likely_pathogenic | 0.6522 | pathogenic | 0.151 | Stabilizing | 0.978 | D | 0.525 | neutral | None | None | None | None | I |
E/M | 0.7131 | likely_pathogenic | 0.678 | pathogenic | -0.078 | Destabilizing | 0.998 | D | 0.563 | neutral | None | None | None | None | I |
E/N | 0.4535 | ambiguous | 0.4276 | ambiguous | 0.117 | Stabilizing | 0.86 | D | 0.443 | neutral | None | None | None | None | I |
E/P | 0.7827 | likely_pathogenic | 0.7531 | pathogenic | 0.108 | Stabilizing | 0.978 | D | 0.497 | neutral | None | None | None | None | I |
E/Q | 0.3259 | likely_benign | 0.3132 | benign | 0.111 | Stabilizing | 0.97 | D | 0.447 | neutral | N | 0.499179044 | None | None | I |
E/R | 0.5719 | likely_pathogenic | 0.5536 | ambiguous | 0.563 | Stabilizing | 0.978 | D | 0.45 | neutral | None | None | None | None | I |
E/S | 0.354 | ambiguous | 0.3258 | benign | -0.006 | Destabilizing | 0.193 | N | 0.352 | neutral | None | None | None | None | I |
E/T | 0.4187 | ambiguous | 0.3944 | ambiguous | 0.077 | Stabilizing | 0.754 | D | 0.487 | neutral | None | None | None | None | I |
E/V | 0.3693 | ambiguous | 0.341 | ambiguous | 0.108 | Stabilizing | 0.97 | D | 0.498 | neutral | N | 0.501757989 | None | None | I |
E/W | 0.9746 | likely_pathogenic | 0.9735 | pathogenic | -0.096 | Destabilizing | 0.998 | D | 0.654 | neutral | None | None | None | None | I |
E/Y | 0.8573 | likely_pathogenic | 0.8508 | pathogenic | 0.093 | Stabilizing | 0.993 | D | 0.549 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.