Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7780 | 23563;23564;23565 | chr2:178720424;178720423;178720422 | chr2:179585151;179585150;179585149 |
N2AB | 7463 | 22612;22613;22614 | chr2:178720424;178720423;178720422 | chr2:179585151;179585150;179585149 |
N2A | 6536 | 19831;19832;19833 | chr2:178720424;178720423;178720422 | chr2:179585151;179585150;179585149 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/E | None | None | 0.997 | N | 0.701 | 0.57 | 0.839276590097 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.66327E-05 |
V/L | rs1220083902 | -0.038 | 0.932 | N | 0.597 | 0.294 | 0.482061804652 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.9E-06 | 0 |
V/L | rs1220083902 | -0.038 | 0.932 | N | 0.597 | 0.294 | 0.482061804652 | gnomAD-4.0.0 | 1.592E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85963E-06 | 0 | 0 |
V/M | None | None | 0.999 | N | 0.733 | 0.453 | 0.547681404787 | gnomAD-4.0.0 | 1.592E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85963E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.2496 | likely_benign | 0.2511 | benign | -0.401 | Destabilizing | 0.995 | D | 0.577 | neutral | N | 0.457078918 | None | None | I |
V/C | 0.9343 | likely_pathogenic | 0.9217 | pathogenic | -0.874 | Destabilizing | 1.0 | D | 0.685 | prob.neutral | None | None | None | None | I |
V/D | 0.902 | likely_pathogenic | 0.9206 | pathogenic | -0.483 | Destabilizing | 1.0 | D | 0.72 | prob.delet. | None | None | None | None | I |
V/E | 0.8094 | likely_pathogenic | 0.8448 | pathogenic | -0.603 | Destabilizing | 0.997 | D | 0.701 | prob.neutral | N | 0.492697903 | None | None | I |
V/F | 0.2487 | likely_benign | 0.2695 | benign | -0.794 | Destabilizing | 0.999 | D | 0.702 | prob.neutral | None | None | None | None | I |
V/G | 0.4786 | ambiguous | 0.492 | ambiguous | -0.445 | Destabilizing | 1.0 | D | 0.701 | prob.neutral | N | 0.500571489 | None | None | I |
V/H | 0.9118 | likely_pathogenic | 0.9269 | pathogenic | -0.023 | Destabilizing | 1.0 | D | 0.726 | prob.delet. | None | None | None | None | I |
V/I | 0.1551 | likely_benign | 0.1705 | benign | -0.424 | Destabilizing | 0.948 | D | 0.516 | neutral | None | None | None | None | I |
V/K | 0.9409 | likely_pathogenic | 0.9544 | pathogenic | -0.461 | Destabilizing | 0.999 | D | 0.706 | prob.neutral | None | None | None | None | I |
V/L | 0.664 | likely_pathogenic | 0.6919 | pathogenic | -0.424 | Destabilizing | 0.932 | D | 0.597 | neutral | N | 0.512625557 | None | None | I |
V/M | 0.4272 | ambiguous | 0.4393 | ambiguous | -0.644 | Destabilizing | 0.999 | D | 0.733 | prob.delet. | N | 0.497470843 | None | None | I |
V/N | 0.7699 | likely_pathogenic | 0.7993 | pathogenic | -0.279 | Destabilizing | 0.992 | D | 0.727 | prob.delet. | None | None | None | None | I |
V/P | 0.9809 | likely_pathogenic | 0.9854 | pathogenic | -0.39 | Destabilizing | 0.992 | D | 0.718 | prob.delet. | None | None | None | None | I |
V/Q | 0.8684 | likely_pathogenic | 0.8841 | pathogenic | -0.504 | Destabilizing | 0.998 | D | 0.723 | prob.delet. | None | None | None | None | I |
V/R | 0.8845 | likely_pathogenic | 0.9016 | pathogenic | 0.014 | Stabilizing | 0.999 | D | 0.727 | prob.delet. | None | None | None | None | I |
V/S | 0.4978 | ambiguous | 0.5184 | ambiguous | -0.573 | Destabilizing | 0.999 | D | 0.707 | prob.neutral | None | None | None | None | I |
V/T | 0.3996 | ambiguous | 0.4282 | ambiguous | -0.607 | Destabilizing | 0.991 | D | 0.674 | neutral | None | None | None | None | I |
V/W | 0.9459 | likely_pathogenic | 0.9494 | pathogenic | -0.831 | Destabilizing | 1.0 | D | 0.741 | deleterious | None | None | None | None | I |
V/Y | 0.7548 | likely_pathogenic | 0.7812 | pathogenic | -0.576 | Destabilizing | 0.999 | D | 0.703 | prob.neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.