Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7783 | 23572;23573;23574 | chr2:178720415;178720414;178720413 | chr2:179585142;179585141;179585140 |
N2AB | 7466 | 22621;22622;22623 | chr2:178720415;178720414;178720413 | chr2:179585142;179585141;179585140 |
N2A | 6539 | 19840;19841;19842 | chr2:178720415;178720414;178720413 | chr2:179585142;179585141;179585140 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/G | rs2078167222 | None | 0.862 | N | 0.527 | 0.432 | 0.329282125956 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | I | None | 0 | 6.55E-05 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
D/G | rs2078167222 | None | 0.862 | N | 0.527 | 0.432 | 0.329282125956 | gnomAD-4.0.0 | 6.57065E-06 | None | None | None | None | I | None | 0 | 6.54793E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
D/H | None | None | 0.998 | N | 0.545 | 0.454 | 0.381071309025 | gnomAD-4.0.0 | 1.59308E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86116E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.3256 | likely_benign | 0.3304 | benign | -0.755 | Destabilizing | 0.637 | D | 0.579 | neutral | N | 0.45334518 | None | None | I |
D/C | 0.8472 | likely_pathogenic | 0.8441 | pathogenic | -0.31 | Destabilizing | 0.005 | N | 0.423 | neutral | None | None | None | None | I |
D/E | 0.5112 | ambiguous | 0.4974 | ambiguous | -0.752 | Destabilizing | 0.006 | N | 0.146 | neutral | N | 0.510585329 | None | None | I |
D/F | 0.9084 | likely_pathogenic | 0.9095 | pathogenic | -0.417 | Destabilizing | 0.993 | D | 0.687 | prob.neutral | None | None | None | None | I |
D/G | 0.407 | ambiguous | 0.3792 | ambiguous | -1.101 | Destabilizing | 0.862 | D | 0.527 | neutral | N | 0.50393885 | None | None | I |
D/H | 0.7186 | likely_pathogenic | 0.7355 | pathogenic | -0.686 | Destabilizing | 0.998 | D | 0.545 | neutral | N | 0.50393885 | None | None | I |
D/I | 0.7939 | likely_pathogenic | 0.8274 | pathogenic | 0.163 | Stabilizing | 0.385 | N | 0.47 | neutral | None | None | None | None | I |
D/K | 0.8658 | likely_pathogenic | 0.8668 | pathogenic | -0.458 | Destabilizing | 0.953 | D | 0.592 | neutral | None | None | None | None | I |
D/L | 0.8381 | likely_pathogenic | 0.8511 | pathogenic | 0.163 | Stabilizing | 0.91 | D | 0.621 | neutral | None | None | None | None | I |
D/M | 0.9237 | likely_pathogenic | 0.9278 | pathogenic | 0.645 | Stabilizing | 0.995 | D | 0.649 | neutral | None | None | None | None | I |
D/N | 0.2356 | likely_benign | 0.2274 | benign | -0.883 | Destabilizing | 0.794 | D | 0.547 | neutral | N | 0.502924892 | None | None | I |
D/P | 0.9958 | likely_pathogenic | 0.9953 | pathogenic | -0.118 | Destabilizing | 0.896 | D | 0.614 | neutral | None | None | None | None | I |
D/Q | 0.7786 | likely_pathogenic | 0.7683 | pathogenic | -0.766 | Destabilizing | 0.964 | D | 0.541 | neutral | None | None | None | None | I |
D/R | 0.8739 | likely_pathogenic | 0.8737 | pathogenic | -0.289 | Destabilizing | 0.986 | D | 0.679 | prob.neutral | None | None | None | None | I |
D/S | 0.2119 | likely_benign | 0.2107 | benign | -1.16 | Destabilizing | 0.849 | D | 0.458 | neutral | None | None | None | None | I |
D/T | 0.5123 | ambiguous | 0.5211 | ambiguous | -0.875 | Destabilizing | 0.836 | D | 0.556 | neutral | None | None | None | None | I |
D/V | 0.5506 | ambiguous | 0.5893 | pathogenic | -0.118 | Destabilizing | 0.572 | D | 0.625 | neutral | N | 0.473355093 | None | None | I |
D/W | 0.9928 | likely_pathogenic | 0.9927 | pathogenic | -0.218 | Destabilizing | 0.999 | D | 0.703 | prob.neutral | None | None | None | None | I |
D/Y | 0.6896 | likely_pathogenic | 0.7186 | pathogenic | -0.166 | Destabilizing | 0.997 | D | 0.669 | neutral | D | 0.524929941 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.