Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7784 | 23575;23576;23577 | chr2:178720412;178720411;178720410 | chr2:179585139;179585138;179585137 |
N2AB | 7467 | 22624;22625;22626 | chr2:178720412;178720411;178720410 | chr2:179585139;179585138;179585137 |
N2A | 6540 | 19843;19844;19845 | chr2:178720412;178720411;178720410 | chr2:179585139;179585138;179585137 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/K | None | None | 0.224 | N | 0.466 | 0.179 | 0.459370960843 | gnomAD-4.0.0 | 1.36909E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.7995E-06 | 0 | 0 |
T/M | rs745569991 | 0.089 | 0.901 | N | 0.539 | 0.263 | 0.746022067851 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.28E-05 | None | 0 | 0 | 0 |
T/M | rs745569991 | 0.089 | 0.901 | N | 0.539 | 0.263 | 0.746022067851 | gnomAD-4.0.0 | 1.36909E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99751E-07 | 1.16104E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0987 | likely_benign | 0.0792 | benign | -0.829 | Destabilizing | 0.003 | N | 0.435 | neutral | N | 0.48621667 | None | None | N |
T/C | 0.4899 | ambiguous | 0.3826 | ambiguous | -0.427 | Destabilizing | 0.857 | D | 0.529 | neutral | None | None | None | None | N |
T/D | 0.4432 | ambiguous | 0.3662 | ambiguous | -0.189 | Destabilizing | 0.031 | N | 0.462 | neutral | None | None | None | None | N |
T/E | 0.4205 | ambiguous | 0.3682 | ambiguous | -0.2 | Destabilizing | 0.097 | N | 0.462 | neutral | None | None | None | None | N |
T/F | 0.1673 | likely_benign | 0.1328 | benign | -0.922 | Destabilizing | 0.738 | D | 0.588 | neutral | None | None | None | None | N |
T/G | 0.2863 | likely_benign | 0.2179 | benign | -1.077 | Destabilizing | 0.213 | N | 0.523 | neutral | None | None | None | None | N |
T/H | 0.2811 | likely_benign | 0.2346 | benign | -1.313 | Destabilizing | 0.681 | D | 0.576 | neutral | None | None | None | None | N |
T/I | 0.1167 | likely_benign | 0.0957 | benign | -0.261 | Destabilizing | 0.131 | N | 0.484 | neutral | None | None | None | None | N |
T/K | 0.3388 | likely_benign | 0.3051 | benign | -0.776 | Destabilizing | 0.224 | N | 0.466 | neutral | N | 0.516532654 | None | None | N |
T/L | 0.1027 | likely_benign | 0.0874 | benign | -0.261 | Destabilizing | 0.058 | N | 0.493 | neutral | None | None | None | None | N |
T/M | 0.0997 | likely_benign | 0.0856 | benign | 0.042 | Stabilizing | 0.901 | D | 0.539 | neutral | N | 0.491523042 | None | None | N |
T/N | 0.1285 | likely_benign | 0.1062 | benign | -0.655 | Destabilizing | None | N | 0.297 | neutral | None | None | None | None | N |
T/P | 0.4287 | ambiguous | 0.3523 | ambiguous | -0.418 | Destabilizing | 0.257 | N | 0.551 | neutral | N | 0.507652288 | None | None | N |
T/Q | 0.3266 | likely_benign | 0.2798 | benign | -0.82 | Destabilizing | 0.33 | N | 0.557 | neutral | None | None | None | None | N |
T/R | 0.2614 | likely_benign | 0.2367 | benign | -0.498 | Destabilizing | 0.844 | D | 0.549 | neutral | N | 0.487751329 | None | None | N |
T/S | 0.0995 | likely_benign | 0.0818 | benign | -0.928 | Destabilizing | None | N | 0.182 | neutral | N | 0.414002932 | None | None | N |
T/V | 0.11 | likely_benign | 0.0913 | benign | -0.418 | Destabilizing | 0.001 | N | 0.317 | neutral | None | None | None | None | N |
T/W | 0.5859 | likely_pathogenic | 0.4963 | ambiguous | -0.861 | Destabilizing | 0.985 | D | 0.639 | neutral | None | None | None | None | N |
T/Y | 0.2406 | likely_benign | 0.1979 | benign | -0.646 | Destabilizing | 0.851 | D | 0.592 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.