Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7787 | 23584;23585;23586 | chr2:178720403;178720402;178720401 | chr2:179585130;179585129;179585128 |
N2AB | 7470 | 22633;22634;22635 | chr2:178720403;178720402;178720401 | chr2:179585130;179585129;179585128 |
N2A | 6543 | 19852;19853;19854 | chr2:178720403;178720402;178720401 | chr2:179585130;179585129;179585128 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
C/F | rs1332033261 | None | 0.954 | N | 0.797 | 0.356 | 0.7694930422 | gnomAD-4.0.0 | 6.84853E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.00051E-07 | 0 | 0 |
C/S | rs1332033261 | -2.417 | 0.002 | N | 0.392 | 0.33 | 0.546736107678 | gnomAD-2.1.1 | 4.04E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.92E-06 | 0 |
C/S | rs1332033261 | -2.417 | 0.002 | N | 0.392 | 0.33 | 0.546736107678 | gnomAD-4.0.0 | 6.84853E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.00051E-07 | 0 | 0 |
C/Y | None | None | 0.954 | N | 0.779 | 0.369 | 0.728244352428 | gnomAD-4.0.0 | 6.84853E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.51965E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
C/A | 0.231 | likely_benign | 0.2157 | benign | -2.122 | Highly Destabilizing | 0.002 | N | 0.113 | neutral | None | None | None | None | N |
C/D | 0.875 | likely_pathogenic | 0.8581 | pathogenic | -1.514 | Destabilizing | 0.561 | D | 0.693 | prob.neutral | None | None | None | None | N |
C/E | 0.9457 | likely_pathogenic | 0.9399 | pathogenic | -1.325 | Destabilizing | 0.561 | D | 0.693 | prob.neutral | None | None | None | None | N |
C/F | 0.3112 | likely_benign | 0.2674 | benign | -1.391 | Destabilizing | 0.954 | D | 0.797 | deleterious | N | 0.479454346 | None | None | N |
C/G | 0.1239 | likely_benign | 0.1184 | benign | -2.482 | Highly Destabilizing | 0.001 | N | 0.534 | neutral | N | 0.437127721 | None | None | N |
C/H | 0.8118 | likely_pathogenic | 0.7983 | pathogenic | -2.599 | Highly Destabilizing | 0.965 | D | 0.759 | deleterious | None | None | None | None | N |
C/I | 0.4918 | ambiguous | 0.4647 | ambiguous | -1.151 | Destabilizing | 0.561 | D | 0.71 | prob.delet. | None | None | None | None | N |
C/K | 0.9703 | likely_pathogenic | 0.9658 | pathogenic | -1.578 | Destabilizing | 0.561 | D | 0.695 | prob.neutral | None | None | None | None | N |
C/L | 0.5073 | ambiguous | 0.4753 | ambiguous | -1.151 | Destabilizing | 0.345 | N | 0.618 | neutral | None | None | None | None | N |
C/M | 0.7002 | likely_pathogenic | 0.6706 | pathogenic | 0.188 | Stabilizing | 0.965 | D | 0.747 | deleterious | None | None | None | None | N |
C/N | 0.7198 | likely_pathogenic | 0.6997 | pathogenic | -1.926 | Destabilizing | 0.561 | D | 0.711 | prob.delet. | None | None | None | None | N |
C/P | 0.9753 | likely_pathogenic | 0.974 | pathogenic | -1.451 | Destabilizing | 0.722 | D | 0.771 | deleterious | None | None | None | None | N |
C/Q | 0.8701 | likely_pathogenic | 0.8624 | pathogenic | -1.62 | Destabilizing | 0.901 | D | 0.812 | deleterious | None | None | None | None | N |
C/R | 0.8344 | likely_pathogenic | 0.8194 | pathogenic | -1.695 | Destabilizing | 0.491 | N | 0.799 | deleterious | N | 0.488908787 | None | None | N |
C/S | 0.1951 | likely_benign | 0.1806 | benign | -2.352 | Highly Destabilizing | 0.002 | N | 0.392 | neutral | N | 0.442360182 | None | None | N |
C/T | 0.323 | likely_benign | 0.2992 | benign | -1.975 | Destabilizing | 0.007 | N | 0.415 | neutral | None | None | None | None | N |
C/V | 0.3564 | ambiguous | 0.3383 | benign | -1.451 | Destabilizing | 0.345 | N | 0.623 | neutral | None | None | None | None | N |
C/W | 0.7913 | likely_pathogenic | 0.7514 | pathogenic | -1.6 | Destabilizing | 0.987 | D | 0.727 | prob.delet. | N | 0.500683166 | None | None | N |
C/Y | 0.5656 | likely_pathogenic | 0.5235 | ambiguous | -1.542 | Destabilizing | 0.954 | D | 0.779 | deleterious | N | 0.494866515 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.