Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7801 | 23626;23627;23628 | chr2:178720241;178720240;178720239 | chr2:179584968;179584967;179584966 |
N2AB | 7484 | 22675;22676;22677 | chr2:178720241;178720240;178720239 | chr2:179584968;179584967;179584966 |
N2A | 6557 | 19894;19895;19896 | chr2:178720241;178720240;178720239 | chr2:179584968;179584967;179584966 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/V | None | None | 0.624 | N | 0.473 | 0.124 | 0.324161360171 | gnomAD-4.0.0 | 6.85611E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.16621E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.7492 | likely_pathogenic | 0.7501 | pathogenic | -2.104 | Highly Destabilizing | 0.996 | D | 0.515 | neutral | None | None | None | None | N |
L/C | 0.8944 | likely_pathogenic | 0.8864 | pathogenic | -1.479 | Destabilizing | 0.82 | D | 0.393 | neutral | None | None | None | None | N |
L/D | 0.9896 | likely_pathogenic | 0.9922 | pathogenic | -1.352 | Destabilizing | 1.0 | D | 0.803 | deleterious | None | None | None | None | N |
L/E | 0.9602 | likely_pathogenic | 0.9688 | pathogenic | -1.216 | Destabilizing | 1.0 | D | 0.8 | deleterious | None | None | None | None | N |
L/F | 0.5239 | ambiguous | 0.5505 | ambiguous | -1.3 | Destabilizing | 0.999 | D | 0.632 | neutral | None | None | None | None | N |
L/G | 0.9462 | likely_pathogenic | 0.9527 | pathogenic | -2.575 | Highly Destabilizing | 0.999 | D | 0.786 | deleterious | None | None | None | None | N |
L/H | 0.9372 | likely_pathogenic | 0.9557 | pathogenic | -1.844 | Destabilizing | 1.0 | D | 0.767 | deleterious | None | None | None | None | N |
L/I | 0.1039 | likely_benign | 0.1049 | benign | -0.804 | Destabilizing | 0.076 | N | 0.253 | neutral | N | 0.513643411 | None | None | N |
L/K | 0.9626 | likely_pathogenic | 0.9733 | pathogenic | -1.285 | Destabilizing | 0.994 | D | 0.758 | deleterious | None | None | None | None | N |
L/M | 0.2504 | likely_benign | 0.2362 | benign | -0.771 | Destabilizing | 0.996 | D | 0.649 | neutral | None | None | None | None | N |
L/N | 0.9428 | likely_pathogenic | 0.9561 | pathogenic | -1.303 | Destabilizing | 1.0 | D | 0.804 | deleterious | None | None | None | None | N |
L/P | 0.3965 | ambiguous | 0.366 | ambiguous | -1.211 | Destabilizing | 1.0 | D | 0.807 | deleterious | N | 0.441585738 | None | None | N |
L/Q | 0.8889 | likely_pathogenic | 0.9128 | pathogenic | -1.288 | Destabilizing | 0.999 | D | 0.769 | deleterious | N | 0.5192025 | None | None | N |
L/R | 0.9323 | likely_pathogenic | 0.9507 | pathogenic | -0.964 | Destabilizing | 0.999 | D | 0.774 | deleterious | N | 0.5192025 | None | None | N |
L/S | 0.9318 | likely_pathogenic | 0.9448 | pathogenic | -2.131 | Highly Destabilizing | 0.999 | D | 0.723 | prob.delet. | None | None | None | None | N |
L/T | 0.8051 | likely_pathogenic | 0.8149 | pathogenic | -1.848 | Destabilizing | 0.998 | D | 0.703 | prob.neutral | None | None | None | None | N |
L/V | 0.1727 | likely_benign | 0.1564 | benign | -1.211 | Destabilizing | 0.624 | D | 0.473 | neutral | N | 0.47078831 | None | None | N |
L/W | 0.8944 | likely_pathogenic | 0.9168 | pathogenic | -1.46 | Destabilizing | 1.0 | D | 0.73 | prob.delet. | None | None | None | None | N |
L/Y | 0.9261 | likely_pathogenic | 0.9405 | pathogenic | -1.198 | Destabilizing | 0.996 | D | 0.755 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.