Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7804 | 23635;23636;23637 | chr2:178720232;178720231;178720230 | chr2:179584959;179584958;179584957 |
N2AB | 7487 | 22684;22685;22686 | chr2:178720232;178720231;178720230 | chr2:179584959;179584958;179584957 |
N2A | 6560 | 19903;19904;19905 | chr2:178720232;178720231;178720230 | chr2:179584959;179584958;179584957 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | rs1319873133 | -0.278 | None | N | 0.082 | 0.075 | 0.170165803431 | gnomAD-2.1.1 | 4.05E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 5.58E-05 | None | 0 | None | 0 | 0 | 0 |
T/A | rs1319873133 | -0.278 | None | N | 0.082 | 0.075 | 0.170165803431 | gnomAD-4.0.0 | 1.59579E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 2.77485E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0788 | likely_benign | 0.0734 | benign | -0.742 | Destabilizing | None | N | 0.082 | neutral | N | 0.477299475 | None | None | I |
T/C | 0.3734 | ambiguous | 0.3255 | benign | -0.396 | Destabilizing | 0.824 | D | 0.259 | neutral | None | None | None | None | I |
T/D | 0.2966 | likely_benign | 0.2689 | benign | 0.038 | Stabilizing | 0.149 | N | 0.349 | neutral | None | None | None | None | I |
T/E | 0.2426 | likely_benign | 0.2252 | benign | 0.004 | Stabilizing | 0.149 | N | 0.284 | neutral | None | None | None | None | I |
T/F | 0.1538 | likely_benign | 0.1483 | benign | -1.074 | Destabilizing | 0.38 | N | 0.362 | neutral | None | None | None | None | I |
T/G | 0.2515 | likely_benign | 0.2188 | benign | -0.941 | Destabilizing | 0.081 | N | 0.283 | neutral | None | None | None | None | I |
T/H | 0.1945 | likely_benign | 0.19 | benign | -1.363 | Destabilizing | 0.001 | N | 0.209 | neutral | None | None | None | None | I |
T/I | 0.0941 | likely_benign | 0.0901 | benign | -0.314 | Destabilizing | 0.027 | N | 0.265 | neutral | N | 0.473104377 | None | None | I |
T/K | 0.1701 | likely_benign | 0.1567 | benign | -0.527 | Destabilizing | 0.149 | N | 0.299 | neutral | None | None | None | None | I |
T/L | 0.0927 | likely_benign | 0.0934 | benign | -0.314 | Destabilizing | 0.035 | N | 0.254 | neutral | None | None | None | None | I |
T/M | 0.0889 | likely_benign | 0.0881 | benign | 0.053 | Stabilizing | 0.016 | N | 0.199 | neutral | None | None | None | None | I |
T/N | 0.1077 | likely_benign | 0.1049 | benign | -0.369 | Destabilizing | 0.117 | N | 0.263 | neutral | N | 0.487289399 | None | None | I |
T/P | 0.3744 | ambiguous | 0.3031 | benign | -0.426 | Destabilizing | 0.317 | N | 0.329 | neutral | N | 0.505482559 | None | None | I |
T/Q | 0.195 | likely_benign | 0.1835 | benign | -0.591 | Destabilizing | 0.555 | D | 0.325 | neutral | None | None | None | None | I |
T/R | 0.1293 | likely_benign | 0.1285 | benign | -0.341 | Destabilizing | 0.38 | N | 0.333 | neutral | None | None | None | None | I |
T/S | 0.1012 | likely_benign | 0.0967 | benign | -0.65 | Destabilizing | 0.027 | N | 0.232 | neutral | D | 0.524303988 | None | None | I |
T/V | 0.0934 | likely_benign | 0.0912 | benign | -0.426 | Destabilizing | None | N | 0.09 | neutral | None | None | None | None | I |
T/W | 0.5329 | ambiguous | 0.5049 | ambiguous | -0.998 | Destabilizing | 0.935 | D | 0.315 | neutral | None | None | None | None | I |
T/Y | 0.1916 | likely_benign | 0.1861 | benign | -0.742 | Destabilizing | 0.38 | N | 0.36 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.