Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7813 | 23662;23663;23664 | chr2:178720205;178720204;178720203 | chr2:179584932;179584931;179584930 |
N2AB | 7496 | 22711;22712;22713 | chr2:178720205;178720204;178720203 | chr2:179584932;179584931;179584930 |
N2A | 6569 | 19930;19931;19932 | chr2:178720205;178720204;178720203 | chr2:179584932;179584931;179584930 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/Q | None | None | 0.001 | N | 0.323 | 0.146 | 0.0551355673512 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.66327E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1668 | likely_benign | 0.1295 | benign | -0.719 | Destabilizing | None | N | 0.308 | neutral | N | 0.467425545 | None | None | N |
E/C | 0.8743 | likely_pathogenic | 0.8455 | pathogenic | -0.29 | Destabilizing | 0.883 | D | 0.463 | neutral | None | None | None | None | N |
E/D | 0.2222 | likely_benign | 0.1854 | benign | -0.715 | Destabilizing | 0.001 | N | 0.229 | neutral | N | 0.484645869 | None | None | N |
E/F | 0.7392 | likely_pathogenic | 0.6561 | pathogenic | -0.344 | Destabilizing | 0.667 | D | 0.474 | neutral | None | None | None | None | N |
E/G | 0.2292 | likely_benign | 0.1923 | benign | -0.995 | Destabilizing | None | N | 0.344 | neutral | N | 0.468872072 | None | None | N |
E/H | 0.4686 | ambiguous | 0.4075 | ambiguous | -0.321 | Destabilizing | 0.497 | N | 0.469 | neutral | None | None | None | None | N |
E/I | 0.3674 | ambiguous | 0.2845 | benign | 0.006 | Stabilizing | 0.124 | N | 0.5 | neutral | None | None | None | None | N |
E/K | 0.2087 | likely_benign | 0.1653 | benign | -0.075 | Destabilizing | 0.042 | N | 0.481 | neutral | N | 0.430464667 | None | None | N |
E/L | 0.4315 | ambiguous | 0.3414 | ambiguous | 0.006 | Stabilizing | 0.124 | N | 0.491 | neutral | None | None | None | None | N |
E/M | 0.4808 | ambiguous | 0.3943 | ambiguous | 0.247 | Stabilizing | 0.667 | D | 0.466 | neutral | None | None | None | None | N |
E/N | 0.3383 | likely_benign | 0.2737 | benign | -0.543 | Destabilizing | 0.22 | N | 0.431 | neutral | None | None | None | None | N |
E/P | 0.846 | likely_pathogenic | 0.7855 | pathogenic | -0.215 | Destabilizing | 0.364 | N | 0.5 | neutral | None | None | None | None | N |
E/Q | 0.1283 | likely_benign | 0.115 | benign | -0.475 | Destabilizing | 0.001 | N | 0.323 | neutral | N | 0.427021717 | None | None | N |
E/R | 0.3179 | likely_benign | 0.2727 | benign | 0.202 | Stabilizing | 0.124 | N | 0.433 | neutral | None | None | None | None | N |
E/S | 0.2057 | likely_benign | 0.1694 | benign | -0.74 | Destabilizing | 0.011 | N | 0.253 | neutral | None | None | None | None | N |
E/T | 0.1962 | likely_benign | 0.1544 | benign | -0.512 | Destabilizing | 0.055 | N | 0.506 | neutral | None | None | None | None | N |
E/V | 0.2086 | likely_benign | 0.1622 | benign | -0.215 | Destabilizing | 0.003 | N | 0.387 | neutral | N | 0.474946163 | None | None | N |
E/W | 0.9001 | likely_pathogenic | 0.8625 | pathogenic | -0.086 | Destabilizing | 0.958 | D | 0.49 | neutral | None | None | None | None | N |
E/Y | 0.6471 | likely_pathogenic | 0.5635 | ambiguous | -0.081 | Destabilizing | 0.667 | D | 0.468 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.