Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7818 | 23677;23678;23679 | chr2:178720190;178720189;178720188 | chr2:179584917;179584916;179584915 |
N2AB | 7501 | 22726;22727;22728 | chr2:178720190;178720189;178720188 | chr2:179584917;179584916;179584915 |
N2A | 6574 | 19945;19946;19947 | chr2:178720190;178720189;178720188 | chr2:179584917;179584916;179584915 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | None | None | 0.76 | D | 0.643 | 0.512 | 0.699956752411 | gnomAD-4.0.0 | 1.5915E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85871E-06 | 0 | 0 |
V/M | rs748019401 | -0.43 | 0.997 | D | 0.747 | 0.514 | 0.681819901562 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.92E-06 | 0 |
V/M | rs748019401 | -0.43 | 0.997 | D | 0.747 | 0.514 | 0.681819901562 | gnomAD-4.0.0 | 1.5915E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85871E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.4745 | ambiguous | 0.4318 | ambiguous | -1.93 | Destabilizing | 0.76 | D | 0.643 | neutral | D | 0.532067827 | None | None | N |
V/C | 0.9379 | likely_pathogenic | 0.9236 | pathogenic | -1.241 | Destabilizing | 0.999 | D | 0.833 | deleterious | None | None | None | None | N |
V/D | 0.9944 | likely_pathogenic | 0.9936 | pathogenic | -2.818 | Highly Destabilizing | 0.986 | D | 0.855 | deleterious | None | None | None | None | N |
V/E | 0.9801 | likely_pathogenic | 0.9759 | pathogenic | -2.521 | Highly Destabilizing | 0.982 | D | 0.836 | deleterious | D | 0.606892255 | None | None | N |
V/F | 0.6686 | likely_pathogenic | 0.6298 | pathogenic | -1.082 | Destabilizing | 0.993 | D | 0.833 | deleterious | None | None | None | None | N |
V/G | 0.8367 | likely_pathogenic | 0.8051 | pathogenic | -2.525 | Highly Destabilizing | 0.982 | D | 0.838 | deleterious | D | 0.597373505 | None | None | N |
V/H | 0.9937 | likely_pathogenic | 0.9923 | pathogenic | -2.482 | Highly Destabilizing | 0.999 | D | 0.868 | deleterious | None | None | None | None | N |
V/I | 0.1019 | likely_benign | 0.0932 | benign | -0.222 | Destabilizing | 0.893 | D | 0.572 | neutral | None | None | None | None | N |
V/K | 0.9876 | likely_pathogenic | 0.985 | pathogenic | -1.49 | Destabilizing | 0.986 | D | 0.839 | deleterious | None | None | None | None | N |
V/L | 0.4862 | ambiguous | 0.4388 | ambiguous | -0.222 | Destabilizing | 0.76 | D | 0.639 | neutral | D | 0.577471854 | None | None | N |
V/M | 0.4876 | ambiguous | 0.4045 | ambiguous | -0.343 | Destabilizing | 0.997 | D | 0.747 | deleterious | D | 0.590469286 | None | None | N |
V/N | 0.9831 | likely_pathogenic | 0.9789 | pathogenic | -2.073 | Highly Destabilizing | 0.986 | D | 0.847 | deleterious | None | None | None | None | N |
V/P | 0.9671 | likely_pathogenic | 0.9695 | pathogenic | -0.769 | Destabilizing | 0.993 | D | 0.847 | deleterious | None | None | None | None | N |
V/Q | 0.9762 | likely_pathogenic | 0.9705 | pathogenic | -1.76 | Destabilizing | 0.993 | D | 0.848 | deleterious | None | None | None | None | N |
V/R | 0.9755 | likely_pathogenic | 0.9717 | pathogenic | -1.594 | Destabilizing | 0.993 | D | 0.849 | deleterious | None | None | None | None | N |
V/S | 0.8576 | likely_pathogenic | 0.8208 | pathogenic | -2.611 | Highly Destabilizing | 0.973 | D | 0.805 | deleterious | None | None | None | None | N |
V/T | 0.5405 | ambiguous | 0.499 | ambiguous | -2.158 | Highly Destabilizing | 0.214 | N | 0.328 | neutral | None | None | None | None | N |
V/W | 0.992 | likely_pathogenic | 0.9901 | pathogenic | -1.715 | Destabilizing | 0.999 | D | 0.845 | deleterious | None | None | None | None | N |
V/Y | 0.9773 | likely_pathogenic | 0.9736 | pathogenic | -1.276 | Destabilizing | 0.998 | D | 0.829 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.