Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7819 | 23680;23681;23682 | chr2:178720187;178720186;178720185 | chr2:179584914;179584913;179584912 |
N2AB | 7502 | 22729;22730;22731 | chr2:178720187;178720186;178720185 | chr2:179584914;179584913;179584912 |
N2A | 6575 | 19948;19949;19950 | chr2:178720187;178720186;178720185 | chr2:179584914;179584913;179584912 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/Q | rs201420077 | -0.177 | 0.468 | D | 0.455 | 0.191 | None | gnomAD-2.1.1 | 1.96659E-04 | None | None | None | None | I | None | 0 | 2.83E-05 | None | 0 | 0 | None | 6.54E-05 | None | 7.99E-05 | 3.52676E-04 | 7.03037E-04 |
E/Q | rs201420077 | -0.177 | 0.468 | D | 0.455 | 0.191 | None | gnomAD-3.1.2 | 1.97119E-04 | None | None | None | None | I | None | 0 | 0 | 0 | 2.88184E-04 | 0 | None | 3.76506E-04 | 0 | 3.52837E-04 | 0 | 4.78927E-04 |
E/Q | rs201420077 | -0.177 | 0.468 | D | 0.455 | 0.191 | None | gnomAD-4.0.0 | 2.22478E-04 | None | None | None | None | I | None | 1.33472E-05 | 5.00083E-05 | None | 6.75676E-05 | 2.22836E-05 | None | 2.81241E-04 | 1.64474E-04 | 2.71248E-04 | 5.48992E-05 | 1.28098E-04 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.285 | likely_benign | 0.2817 | benign | -0.526 | Destabilizing | 0.399 | N | 0.511 | neutral | N | 0.520495679 | None | None | I |
E/C | 0.9601 | likely_pathogenic | 0.9606 | pathogenic | -0.168 | Destabilizing | 0.986 | D | 0.699 | prob.neutral | None | None | None | None | I |
E/D | 0.22 | likely_benign | 0.2318 | benign | -0.531 | Destabilizing | None | N | 0.189 | neutral | N | 0.519572959 | None | None | I |
E/F | 0.9348 | likely_pathogenic | 0.9384 | pathogenic | -0.216 | Destabilizing | 0.972 | D | 0.645 | neutral | None | None | None | None | I |
E/G | 0.3978 | ambiguous | 0.3878 | ambiguous | -0.772 | Destabilizing | 0.688 | D | 0.533 | neutral | N | 0.49271113 | None | None | I |
E/H | 0.6825 | likely_pathogenic | 0.7061 | pathogenic | -0.054 | Destabilizing | 0.962 | D | 0.482 | neutral | None | None | None | None | I |
E/I | 0.7232 | likely_pathogenic | 0.7231 | pathogenic | 0.107 | Stabilizing | 0.844 | D | 0.637 | neutral | None | None | None | None | I |
E/K | 0.2999 | likely_benign | 0.3194 | benign | 0.199 | Stabilizing | 0.016 | N | 0.24 | neutral | N | 0.473107163 | None | None | I |
E/L | 0.7405 | likely_pathogenic | 0.7374 | pathogenic | 0.107 | Stabilizing | 0.728 | D | 0.537 | neutral | None | None | None | None | I |
E/M | 0.7704 | likely_pathogenic | 0.7672 | pathogenic | 0.237 | Stabilizing | 0.918 | D | 0.637 | neutral | None | None | None | None | I |
E/N | 0.4945 | ambiguous | 0.5049 | ambiguous | -0.27 | Destabilizing | 0.151 | N | 0.447 | neutral | None | None | None | None | I |
E/P | 0.9885 | likely_pathogenic | 0.99 | pathogenic | -0.083 | Destabilizing | 0.447 | N | 0.556 | neutral | None | None | None | None | I |
E/Q | 0.218 | likely_benign | 0.2185 | benign | -0.215 | Destabilizing | 0.468 | N | 0.455 | neutral | D | 0.531347391 | None | None | I |
E/R | 0.4545 | ambiguous | 0.4969 | ambiguous | 0.468 | Stabilizing | 0.012 | N | 0.213 | neutral | None | None | None | None | I |
E/S | 0.3126 | likely_benign | 0.3075 | benign | -0.44 | Destabilizing | 0.468 | N | 0.438 | neutral | None | None | None | None | I |
E/T | 0.3745 | ambiguous | 0.3705 | ambiguous | -0.236 | Destabilizing | 0.549 | D | 0.499 | neutral | None | None | None | None | I |
E/V | 0.468 | ambiguous | 0.4721 | ambiguous | -0.083 | Destabilizing | 0.744 | D | 0.549 | neutral | N | 0.490887478 | None | None | I |
E/W | 0.971 | likely_pathogenic | 0.9751 | pathogenic | 0.011 | Stabilizing | 0.997 | D | 0.697 | prob.neutral | None | None | None | None | I |
E/Y | 0.8731 | likely_pathogenic | 0.8817 | pathogenic | 0.049 | Stabilizing | 0.99 | D | 0.633 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.