Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7821 | 23686;23687;23688 | chr2:178720181;178720180;178720179 | chr2:179584908;179584907;179584906 |
N2AB | 7504 | 22735;22736;22737 | chr2:178720181;178720180;178720179 | chr2:179584908;179584907;179584906 |
N2A | 6577 | 19954;19955;19956 | chr2:178720181;178720180;178720179 | chr2:179584908;179584907;179584906 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/L | rs1478276063 | -0.14 | 0.047 | N | 0.249 | 0.288 | 0.368183359018 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.91E-06 | 0 |
F/L | rs1478276063 | -0.14 | 0.047 | N | 0.249 | 0.288 | 0.368183359018 | gnomAD-4.0.0 | 8.21097E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.07941E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/A | 0.2622 | likely_benign | 0.1828 | benign | -0.556 | Destabilizing | 0.061 | N | 0.391 | neutral | None | None | None | None | I |
F/C | 0.2281 | likely_benign | 0.1784 | benign | -0.189 | Destabilizing | 0.794 | D | 0.511 | neutral | N | 0.51479907 | None | None | I |
F/D | 0.4315 | ambiguous | 0.3364 | benign | 0.683 | Stabilizing | 0.418 | N | 0.551 | neutral | None | None | None | None | I |
F/E | 0.569 | likely_pathogenic | 0.4845 | ambiguous | 0.638 | Stabilizing | 0.418 | N | 0.541 | neutral | None | None | None | None | I |
F/G | 0.5252 | ambiguous | 0.4129 | ambiguous | -0.686 | Destabilizing | 0.129 | N | 0.532 | neutral | None | None | None | None | I |
F/H | 0.4093 | ambiguous | 0.3544 | ambiguous | 0.4 | Stabilizing | 0.94 | D | 0.481 | neutral | None | None | None | None | I |
F/I | 0.1431 | likely_benign | 0.0996 | benign | -0.259 | Destabilizing | 0.037 | N | 0.387 | neutral | N | 0.456982918 | None | None | I |
F/K | 0.7185 | likely_pathogenic | 0.6346 | pathogenic | 0.108 | Stabilizing | 0.418 | N | 0.547 | neutral | None | None | None | None | I |
F/L | 0.6237 | likely_pathogenic | 0.5045 | ambiguous | -0.259 | Destabilizing | 0.047 | N | 0.249 | neutral | N | 0.450979665 | None | None | I |
F/M | 0.365 | ambiguous | 0.2819 | benign | -0.33 | Destabilizing | 0.716 | D | 0.401 | neutral | None | None | None | None | I |
F/N | 0.2789 | likely_benign | 0.2104 | benign | 0.129 | Stabilizing | 0.418 | N | 0.574 | neutral | None | None | None | None | I |
F/P | 0.7816 | likely_pathogenic | 0.649 | pathogenic | -0.339 | Destabilizing | 0.593 | D | 0.533 | neutral | None | None | None | None | I |
F/Q | 0.5407 | ambiguous | 0.4517 | ambiguous | 0.097 | Stabilizing | 0.836 | D | 0.523 | neutral | None | None | None | None | I |
F/R | 0.6207 | likely_pathogenic | 0.5357 | ambiguous | 0.417 | Stabilizing | 0.418 | N | 0.532 | neutral | None | None | None | None | I |
F/S | 0.1265 | likely_benign | 0.0975 | benign | -0.41 | Destabilizing | 0.001 | N | 0.281 | neutral | N | 0.358992224 | None | None | I |
F/T | 0.1991 | likely_benign | 0.1503 | benign | -0.367 | Destabilizing | 0.129 | N | 0.507 | neutral | None | None | None | None | I |
F/V | 0.1391 | likely_benign | 0.0978 | benign | -0.339 | Destabilizing | 0.001 | N | 0.235 | neutral | N | 0.431353755 | None | None | I |
F/W | 0.5033 | ambiguous | 0.4504 | ambiguous | -0.353 | Destabilizing | 0.983 | D | 0.449 | neutral | None | None | None | None | I |
F/Y | 0.1277 | likely_benign | 0.1155 | benign | -0.259 | Destabilizing | 0.523 | D | 0.451 | neutral | N | 0.458599071 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.