Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7823 | 23692;23693;23694 | chr2:178720175;178720174;178720173 | chr2:179584902;179584901;179584900 |
N2AB | 7506 | 22741;22742;22743 | chr2:178720175;178720174;178720173 | chr2:179584902;179584901;179584900 |
N2A | 6579 | 19960;19961;19962 | chr2:178720175;178720174;178720173 | chr2:179584902;179584901;179584900 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/L | rs2154300491 | None | 1.0 | N | 0.665 | 0.518 | 0.854352048779 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
P/T | rs768540966 | -0.134 | 0.791 | N | 0.429 | 0.333 | None | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 5.57E-05 | None | 0 | None | 0 | 0 | 0 |
P/T | rs768540966 | -0.134 | 0.791 | N | 0.429 | 0.333 | None | gnomAD-4.0.0 | 2.1896E-05 | None | None | None | None | I | None | 0 | 0 | None | 0 | 8.06289E-04 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.5846 | likely_pathogenic | 0.4729 | ambiguous | -0.446 | Destabilizing | 0.988 | D | 0.599 | neutral | N | 0.49259209 | None | None | I |
P/C | 0.9805 | likely_pathogenic | 0.9675 | pathogenic | -0.566 | Destabilizing | 1.0 | D | 0.671 | neutral | None | None | None | None | I |
P/D | 0.8565 | likely_pathogenic | 0.7991 | pathogenic | -0.407 | Destabilizing | 0.995 | D | 0.669 | neutral | None | None | None | None | I |
P/E | 0.8317 | likely_pathogenic | 0.7578 | pathogenic | -0.538 | Destabilizing | 0.997 | D | 0.661 | neutral | None | None | None | None | I |
P/F | 0.9779 | likely_pathogenic | 0.9631 | pathogenic | -0.781 | Destabilizing | 1.0 | D | 0.669 | neutral | None | None | None | None | I |
P/G | 0.8457 | likely_pathogenic | 0.7885 | pathogenic | -0.554 | Destabilizing | 0.999 | D | 0.627 | neutral | None | None | None | None | I |
P/H | 0.839 | likely_pathogenic | 0.7732 | pathogenic | -0.179 | Destabilizing | 1.0 | D | 0.648 | neutral | None | None | None | None | I |
P/I | 0.9352 | likely_pathogenic | 0.9028 | pathogenic | -0.317 | Destabilizing | 1.0 | D | 0.682 | prob.neutral | None | None | None | None | I |
P/K | 0.9165 | likely_pathogenic | 0.8693 | pathogenic | -0.412 | Destabilizing | 1.0 | D | 0.665 | neutral | None | None | None | None | I |
P/L | 0.7681 | likely_pathogenic | 0.6766 | pathogenic | -0.317 | Destabilizing | 1.0 | D | 0.665 | neutral | N | 0.509241541 | None | None | I |
P/M | 0.9236 | likely_pathogenic | 0.8801 | pathogenic | -0.331 | Destabilizing | 1.0 | D | 0.646 | neutral | None | None | None | None | I |
P/N | 0.8314 | likely_pathogenic | 0.7596 | pathogenic | -0.109 | Destabilizing | 0.999 | D | 0.661 | neutral | None | None | None | None | I |
P/Q | 0.8043 | likely_pathogenic | 0.714 | pathogenic | -0.39 | Destabilizing | 1.0 | D | 0.641 | neutral | N | 0.493869083 | None | None | I |
P/R | 0.8425 | likely_pathogenic | 0.7832 | pathogenic | 0.127 | Stabilizing | 1.0 | D | 0.675 | prob.neutral | N | 0.502493592 | None | None | I |
P/S | 0.7503 | likely_pathogenic | 0.6408 | pathogenic | -0.425 | Destabilizing | 0.998 | D | 0.627 | neutral | N | 0.508481073 | None | None | I |
P/T | 0.6995 | likely_pathogenic | 0.582 | pathogenic | -0.461 | Destabilizing | 0.791 | D | 0.429 | neutral | N | 0.492325374 | None | None | I |
P/V | 0.8537 | likely_pathogenic | 0.7921 | pathogenic | -0.326 | Destabilizing | 0.999 | D | 0.629 | neutral | None | None | None | None | I |
P/W | 0.9886 | likely_pathogenic | 0.9819 | pathogenic | -0.849 | Destabilizing | 1.0 | D | 0.694 | prob.neutral | None | None | None | None | I |
P/Y | 0.9579 | likely_pathogenic | 0.9362 | pathogenic | -0.547 | Destabilizing | 1.0 | D | 0.667 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.