Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7827 | 23704;23705;23706 | chr2:178720163;178720162;178720161 | chr2:179584890;179584889;179584888 |
N2AB | 7510 | 22753;22754;22755 | chr2:178720163;178720162;178720161 | chr2:179584890;179584889;179584888 |
N2A | 6583 | 19972;19973;19974 | chr2:178720163;178720162;178720161 | chr2:179584890;179584889;179584888 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | rs758655083 | -1.585 | 0.041 | N | 0.378 | 0.246 | 0.404733080969 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
V/F | None | None | 0.773 | D | 0.568 | 0.329 | 0.754833360098 | gnomAD-4.0.0 | 1.59146E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.02462E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.1808 | likely_benign | 0.1243 | benign | -1.514 | Destabilizing | 0.041 | N | 0.378 | neutral | N | 0.489324623 | None | None | N |
V/C | 0.7863 | likely_pathogenic | 0.6998 | pathogenic | -0.926 | Destabilizing | 0.944 | D | 0.563 | neutral | None | None | None | None | N |
V/D | 0.4275 | ambiguous | 0.2655 | benign | -1.584 | Destabilizing | 0.324 | N | 0.583 | neutral | N | 0.493010164 | None | None | N |
V/E | 0.3209 | likely_benign | 0.2051 | benign | -1.546 | Destabilizing | 0.116 | N | 0.547 | neutral | None | None | None | None | N |
V/F | 0.1397 | likely_benign | 0.1137 | benign | -1.073 | Destabilizing | 0.773 | D | 0.568 | neutral | D | 0.52320791 | None | None | N |
V/G | 0.2676 | likely_benign | 0.1962 | benign | -1.869 | Destabilizing | 0.324 | N | 0.565 | neutral | N | 0.493770632 | None | None | N |
V/H | 0.5334 | ambiguous | 0.4094 | ambiguous | -1.442 | Destabilizing | 0.818 | D | 0.616 | neutral | None | None | None | None | N |
V/I | 0.0727 | likely_benign | 0.0705 | benign | -0.623 | Destabilizing | 0.09 | N | 0.529 | neutral | N | 0.474819317 | None | None | N |
V/K | 0.444 | ambiguous | 0.3223 | benign | -1.395 | Destabilizing | 0.241 | N | 0.559 | neutral | None | None | None | None | N |
V/L | 0.1204 | likely_benign | 0.1046 | benign | -0.623 | Destabilizing | 0.09 | N | 0.541 | neutral | N | 0.494847873 | None | None | N |
V/M | 0.1136 | likely_benign | 0.0942 | benign | -0.431 | Destabilizing | 0.818 | D | 0.561 | neutral | None | None | None | None | N |
V/N | 0.2676 | likely_benign | 0.1744 | benign | -1.266 | Destabilizing | 0.388 | N | 0.593 | neutral | None | None | None | None | N |
V/P | 0.9504 | likely_pathogenic | 0.903 | pathogenic | -0.886 | Destabilizing | 0.818 | D | 0.586 | neutral | None | None | None | None | N |
V/Q | 0.3098 | likely_benign | 0.2198 | benign | -1.382 | Destabilizing | 0.024 | N | 0.41 | neutral | None | None | None | None | N |
V/R | 0.3848 | ambiguous | 0.2783 | benign | -0.878 | Destabilizing | 0.388 | N | 0.617 | neutral | None | None | None | None | N |
V/S | 0.181 | likely_benign | 0.1207 | benign | -1.76 | Destabilizing | 0.024 | N | 0.429 | neutral | None | None | None | None | N |
V/T | 0.1406 | likely_benign | 0.0932 | benign | -1.612 | Destabilizing | 0.001 | N | 0.214 | neutral | None | None | None | None | N |
V/W | 0.7642 | likely_pathogenic | 0.6855 | pathogenic | -1.363 | Destabilizing | 0.981 | D | 0.65 | neutral | None | None | None | None | N |
V/Y | 0.5024 | ambiguous | 0.4093 | ambiguous | -1.044 | Destabilizing | 0.818 | D | 0.57 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.