Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7834 | 23725;23726;23727 | chr2:178720142;178720141;178720140 | chr2:179584869;179584868;179584867 |
N2AB | 7517 | 22774;22775;22776 | chr2:178720142;178720141;178720140 | chr2:179584869;179584868;179584867 |
N2A | 6590 | 19993;19994;19995 | chr2:178720142;178720141;178720140 | chr2:179584869;179584868;179584867 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | None | None | 0.036 | D | 0.302 | 0.136 | 0.220303561663 | gnomAD-4.0.0 | 1.59143E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85873E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1992 | likely_benign | 0.2108 | benign | -0.72 | Destabilizing | 0.02 | N | 0.339 | neutral | N | 0.498658931 | None | None | N |
E/C | 0.8691 | likely_pathogenic | 0.8879 | pathogenic | -0.333 | Destabilizing | 0.685 | D | 0.357 | neutral | None | None | None | None | N |
E/D | 0.0867 | likely_benign | 0.1007 | benign | -0.674 | Destabilizing | None | N | 0.181 | neutral | D | 0.537177285 | None | None | N |
E/F | 0.7096 | likely_pathogenic | 0.7448 | pathogenic | -0.329 | Destabilizing | 0.148 | N | 0.361 | neutral | None | None | None | None | N |
E/G | 0.2571 | likely_benign | 0.2606 | benign | -0.995 | Destabilizing | 0.063 | N | 0.335 | neutral | N | 0.518537613 | None | None | N |
E/H | 0.481 | ambiguous | 0.5137 | ambiguous | -0.295 | Destabilizing | None | N | 0.185 | neutral | None | None | None | None | N |
E/I | 0.3386 | likely_benign | 0.3742 | ambiguous | 0.002 | Stabilizing | 0.141 | N | 0.355 | neutral | None | None | None | None | N |
E/K | 0.204 | likely_benign | 0.217 | benign | -0.145 | Destabilizing | 0.036 | N | 0.302 | neutral | D | 0.534019549 | None | None | N |
E/L | 0.4349 | ambiguous | 0.4458 | ambiguous | 0.002 | Stabilizing | 0.023 | N | 0.353 | neutral | None | None | None | None | N |
E/M | 0.4856 | ambiguous | 0.5076 | ambiguous | 0.203 | Stabilizing | 0.253 | N | 0.319 | neutral | None | None | None | None | N |
E/N | 0.2132 | likely_benign | 0.2469 | benign | -0.612 | Destabilizing | 0.005 | N | 0.333 | neutral | None | None | None | None | N |
E/P | 0.8286 | likely_pathogenic | 0.8106 | pathogenic | -0.219 | Destabilizing | 0.024 | N | 0.362 | neutral | None | None | None | None | N |
E/Q | 0.1867 | likely_benign | 0.193 | benign | -0.528 | Destabilizing | 0.026 | N | 0.333 | neutral | N | 0.48609763 | None | None | N |
E/R | 0.3459 | ambiguous | 0.3695 | ambiguous | 0.145 | Stabilizing | 0.148 | N | 0.329 | neutral | None | None | None | None | N |
E/S | 0.2437 | likely_benign | 0.2656 | benign | -0.797 | Destabilizing | 0.013 | N | 0.288 | neutral | None | None | None | None | N |
E/T | 0.2788 | likely_benign | 0.291 | benign | -0.572 | Destabilizing | 0.036 | N | 0.369 | neutral | None | None | None | None | N |
E/V | 0.209 | likely_benign | 0.2276 | benign | -0.219 | Destabilizing | 0.081 | N | 0.339 | neutral | N | 0.500913883 | None | None | N |
E/W | 0.8907 | likely_pathogenic | 0.905 | pathogenic | -0.079 | Destabilizing | None | N | 0.274 | neutral | None | None | None | None | N |
E/Y | 0.5922 | likely_pathogenic | 0.6358 | pathogenic | -0.08 | Destabilizing | 0.317 | N | 0.333 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.