Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7848 | 23767;23768;23769 | chr2:178720100;178720099;178720098 | chr2:179584827;179584826;179584825 |
N2AB | 7531 | 22816;22817;22818 | chr2:178720100;178720099;178720098 | chr2:179584827;179584826;179584825 |
N2A | 6604 | 20035;20036;20037 | chr2:178720100;178720099;178720098 | chr2:179584827;179584826;179584825 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/G | None | None | 0.201 | N | 0.311 | 0.197 | 0.159798565429 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 6.33473E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.2758 | likely_benign | 0.2653 | benign | -0.13 | Destabilizing | 0.016 | N | 0.225 | neutral | N | 0.506175934 | None | None | I |
D/C | 0.7422 | likely_pathogenic | 0.7091 | pathogenic | -0.341 | Destabilizing | 0.992 | D | 0.292 | neutral | None | None | None | None | I |
D/E | 0.1762 | likely_benign | 0.1541 | benign | -0.319 | Destabilizing | 0.004 | N | 0.207 | neutral | N | 0.416882082 | None | None | I |
D/F | 0.8106 | likely_pathogenic | 0.7842 | pathogenic | 0.019 | Stabilizing | 0.972 | D | 0.27 | neutral | None | None | None | None | I |
D/G | 0.117 | likely_benign | 0.1265 | benign | -0.288 | Destabilizing | 0.201 | N | 0.311 | neutral | N | 0.468364121 | None | None | I |
D/H | 0.2926 | likely_benign | 0.2961 | benign | 0.632 | Stabilizing | 0.896 | D | 0.248 | neutral | N | 0.456149868 | None | None | I |
D/I | 0.7943 | likely_pathogenic | 0.7432 | pathogenic | 0.234 | Stabilizing | 0.92 | D | 0.297 | neutral | None | None | None | None | I |
D/K | 0.3932 | ambiguous | 0.3725 | ambiguous | 0.331 | Stabilizing | 0.447 | N | 0.316 | neutral | None | None | None | None | I |
D/L | 0.6642 | likely_pathogenic | 0.633 | pathogenic | 0.234 | Stabilizing | 0.617 | D | 0.343 | neutral | None | None | None | None | I |
D/M | 0.8339 | likely_pathogenic | 0.8016 | pathogenic | -0.005 | Destabilizing | 0.992 | D | 0.271 | neutral | None | None | None | None | I |
D/N | 0.0885 | likely_benign | 0.0902 | benign | -0.163 | Destabilizing | 0.002 | N | 0.116 | neutral | N | 0.427733793 | None | None | I |
D/P | 0.8309 | likely_pathogenic | 0.7922 | pathogenic | 0.132 | Stabilizing | 0.92 | D | 0.286 | neutral | None | None | None | None | I |
D/Q | 0.3367 | likely_benign | 0.3209 | benign | -0.11 | Destabilizing | 0.739 | D | 0.255 | neutral | None | None | None | None | I |
D/R | 0.4045 | ambiguous | 0.3971 | ambiguous | 0.672 | Stabilizing | 0.85 | D | 0.294 | neutral | None | None | None | None | I |
D/S | 0.1415 | likely_benign | 0.1433 | benign | -0.221 | Destabilizing | 0.25 | N | 0.261 | neutral | None | None | None | None | I |
D/T | 0.4583 | ambiguous | 0.4124 | ambiguous | -0.08 | Destabilizing | 0.617 | D | 0.312 | neutral | None | None | None | None | I |
D/V | 0.6127 | likely_pathogenic | 0.5642 | pathogenic | 0.132 | Stabilizing | 0.549 | D | 0.342 | neutral | N | 0.483154893 | None | None | I |
D/W | 0.9073 | likely_pathogenic | 0.8964 | pathogenic | 0.141 | Stabilizing | 0.992 | D | 0.45 | neutral | None | None | None | None | I |
D/Y | 0.3852 | ambiguous | 0.3531 | ambiguous | 0.256 | Stabilizing | 0.963 | D | 0.27 | neutral | N | 0.462417291 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.