Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7853 | 23782;23783;23784 | chr2:178720085;178720084;178720083 | chr2:179584812;179584811;179584810 |
N2AB | 7536 | 22831;22832;22833 | chr2:178720085;178720084;178720083 | chr2:179584812;179584811;179584810 |
N2A | 6609 | 20050;20051;20052 | chr2:178720085;178720084;178720083 | chr2:179584812;179584811;179584810 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/F | rs776061262 | -1.688 | 0.988 | D | 0.806 | 0.609 | 0.685073295601 | gnomAD-2.1.1 | 8.04E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 8.89E-06 | 0 |
L/F | rs776061262 | -1.688 | 0.988 | D | 0.806 | 0.609 | 0.685073295601 | gnomAD-4.0.0 | 3.18285E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43287E-05 | 3.02462E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.9625 | likely_pathogenic | 0.9483 | pathogenic | -2.424 | Highly Destabilizing | 0.976 | D | 0.745 | deleterious | None | None | None | None | N |
L/C | 0.9519 | likely_pathogenic | 0.9355 | pathogenic | -1.893 | Destabilizing | 1.0 | D | 0.861 | deleterious | None | None | None | None | N |
L/D | 0.9998 | likely_pathogenic | 0.9998 | pathogenic | -3.225 | Highly Destabilizing | 1.0 | D | 0.941 | deleterious | None | None | None | None | N |
L/E | 0.9976 | likely_pathogenic | 0.9976 | pathogenic | -2.911 | Highly Destabilizing | 1.0 | D | 0.915 | deleterious | None | None | None | None | N |
L/F | 0.5562 | ambiguous | 0.525 | ambiguous | -1.481 | Destabilizing | 0.988 | D | 0.806 | deleterious | D | 0.551159087 | None | None | N |
L/G | 0.9932 | likely_pathogenic | 0.9918 | pathogenic | -3.04 | Highly Destabilizing | 1.0 | D | 0.913 | deleterious | None | None | None | None | N |
L/H | 0.9904 | likely_pathogenic | 0.991 | pathogenic | -2.798 | Highly Destabilizing | 1.0 | D | 0.918 | deleterious | D | 0.579685049 | None | None | N |
L/I | 0.3041 | likely_benign | 0.2818 | benign | -0.592 | Destabilizing | 0.235 | N | 0.65 | neutral | D | 0.55376598 | None | None | N |
L/K | 0.9949 | likely_pathogenic | 0.9953 | pathogenic | -1.881 | Destabilizing | 0.998 | D | 0.911 | deleterious | None | None | None | None | N |
L/M | 0.389 | ambiguous | 0.3447 | ambiguous | -0.8 | Destabilizing | 0.971 | D | 0.78 | deleterious | None | None | None | None | N |
L/N | 0.9982 | likely_pathogenic | 0.9984 | pathogenic | -2.553 | Highly Destabilizing | 1.0 | D | 0.942 | deleterious | None | None | None | None | N |
L/P | 0.998 | likely_pathogenic | 0.9981 | pathogenic | -1.191 | Destabilizing | 1.0 | D | 0.933 | deleterious | D | 0.579685049 | None | None | N |
L/Q | 0.9867 | likely_pathogenic | 0.9869 | pathogenic | -2.226 | Highly Destabilizing | 1.0 | D | 0.942 | deleterious | None | None | None | None | N |
L/R | 0.9867 | likely_pathogenic | 0.988 | pathogenic | -1.956 | Destabilizing | 1.0 | D | 0.938 | deleterious | D | 0.579685049 | None | None | N |
L/S | 0.9955 | likely_pathogenic | 0.9948 | pathogenic | -3.155 | Highly Destabilizing | 1.0 | D | 0.905 | deleterious | None | None | None | None | N |
L/T | 0.9886 | likely_pathogenic | 0.9863 | pathogenic | -2.666 | Highly Destabilizing | 0.988 | D | 0.84 | deleterious | None | None | None | None | N |
L/V | 0.3504 | ambiguous | 0.3354 | benign | -1.191 | Destabilizing | 0.007 | N | 0.409 | neutral | D | 0.541702113 | None | None | N |
L/W | 0.9561 | likely_pathogenic | 0.9575 | pathogenic | -1.928 | Destabilizing | 1.0 | D | 0.895 | deleterious | None | None | None | None | N |
L/Y | 0.9617 | likely_pathogenic | 0.9572 | pathogenic | -1.62 | Destabilizing | 0.964 | D | 0.861 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.