Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7861 | 23806;23807;23808 | chr2:178720061;178720060;178720059 | chr2:179584788;179584787;179584786 |
N2AB | 7544 | 22855;22856;22857 | chr2:178720061;178720060;178720059 | chr2:179584788;179584787;179584786 |
N2A | 6617 | 20074;20075;20076 | chr2:178720061;178720060;178720059 | chr2:179584788;179584787;179584786 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | None | None | None | N | 0.109 | 0.076 | 0.0551355673512 | gnomAD-4.0.0 | 1.20033E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.31251E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0616 | likely_benign | 0.0625 | benign | -0.221 | Destabilizing | None | N | 0.109 | neutral | N | 0.4106309 | None | None | I |
S/C | 0.154 | likely_benign | 0.1653 | benign | -0.24 | Destabilizing | None | N | 0.205 | neutral | N | 0.486081408 | None | None | I |
S/D | 0.2357 | likely_benign | 0.2156 | benign | 0.026 | Stabilizing | 0.22 | N | 0.155 | neutral | None | None | None | None | I |
S/E | 0.3072 | likely_benign | 0.273 | benign | -0.09 | Destabilizing | 0.22 | N | 0.121 | neutral | None | None | None | None | I |
S/F | 0.1667 | likely_benign | 0.1581 | benign | -0.976 | Destabilizing | 0.001 | N | 0.213 | neutral | N | 0.463115308 | None | None | I |
S/G | 0.071 | likely_benign | 0.069 | benign | -0.258 | Destabilizing | 0.055 | N | 0.187 | neutral | None | None | None | None | I |
S/H | 0.2696 | likely_benign | 0.2488 | benign | -0.668 | Destabilizing | 0.859 | D | 0.334 | neutral | None | None | None | None | I |
S/I | 0.1262 | likely_benign | 0.1232 | benign | -0.254 | Destabilizing | 0.124 | N | 0.283 | neutral | None | None | None | None | I |
S/K | 0.4033 | ambiguous | 0.3583 | ambiguous | -0.307 | Destabilizing | 0.22 | N | 0.119 | neutral | None | None | None | None | I |
S/L | 0.0907 | likely_benign | 0.092 | benign | -0.254 | Destabilizing | 0.055 | N | 0.217 | neutral | None | None | None | None | I |
S/M | 0.1861 | likely_benign | 0.1792 | benign | -0.043 | Destabilizing | 0.667 | D | 0.327 | neutral | None | None | None | None | I |
S/N | 0.1007 | likely_benign | 0.0979 | benign | -0.037 | Destabilizing | 0.22 | N | 0.175 | neutral | None | None | None | None | I |
S/P | 0.145 | likely_benign | 0.1307 | benign | -0.219 | Destabilizing | 0.301 | N | 0.366 | neutral | N | 0.462861818 | None | None | I |
S/Q | 0.3316 | likely_benign | 0.3054 | benign | -0.306 | Destabilizing | 0.667 | D | 0.275 | neutral | None | None | None | None | I |
S/R | 0.3317 | likely_benign | 0.302 | benign | -0.071 | Destabilizing | 0.22 | N | 0.367 | neutral | None | None | None | None | I |
S/T | 0.0806 | likely_benign | 0.0797 | benign | -0.167 | Destabilizing | None | N | 0.083 | neutral | N | 0.438990937 | None | None | I |
S/V | 0.1332 | likely_benign | 0.1319 | benign | -0.219 | Destabilizing | 0.055 | N | 0.211 | neutral | None | None | None | None | I |
S/W | 0.2736 | likely_benign | 0.2617 | benign | -1.033 | Destabilizing | 0.958 | D | 0.329 | neutral | None | None | None | None | I |
S/Y | 0.1711 | likely_benign | 0.1688 | benign | -0.725 | Destabilizing | 0.096 | N | 0.379 | neutral | N | 0.467723664 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.