Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7862 | 23809;23810;23811 | chr2:178720058;178720057;178720056 | chr2:179584785;179584784;179584783 |
N2AB | 7545 | 22858;22859;22860 | chr2:178720058;178720057;178720056 | chr2:179584785;179584784;179584783 |
N2A | 6618 | 20077;20078;20079 | chr2:178720058;178720057;178720056 | chr2:179584785;179584784;179584783 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/T | rs794729629 | -0.543 | 0.006 | N | 0.458 | 0.203 | 0.344945010812 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
N/T | rs794729629 | -0.543 | 0.006 | N | 0.458 | 0.203 | 0.344945010812 | gnomAD-4.0.0 | 1.5918E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43308E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.2055 | likely_benign | 0.1669 | benign | -1.057 | Destabilizing | 0.001 | N | 0.518 | neutral | None | None | None | None | N |
N/C | 0.2374 | likely_benign | 0.1953 | benign | -0.194 | Destabilizing | 0.882 | D | 0.714 | prob.delet. | None | None | None | None | N |
N/D | 0.0936 | likely_benign | 0.1014 | benign | -0.374 | Destabilizing | None | N | 0.239 | neutral | N | 0.348560934 | None | None | N |
N/E | 0.4097 | ambiguous | 0.3837 | ambiguous | -0.246 | Destabilizing | None | N | 0.243 | neutral | None | None | None | None | N |
N/F | 0.456 | ambiguous | 0.3927 | ambiguous | -0.908 | Destabilizing | 0.699 | D | 0.731 | prob.delet. | None | None | None | None | N |
N/G | 0.2673 | likely_benign | 0.2199 | benign | -1.404 | Destabilizing | 0.019 | N | 0.455 | neutral | None | None | None | None | N |
N/H | 0.0792 | likely_benign | 0.0882 | benign | -0.963 | Destabilizing | None | N | 0.367 | neutral | N | 0.454945477 | None | None | N |
N/I | 0.2307 | likely_benign | 0.1972 | benign | -0.165 | Destabilizing | 0.157 | N | 0.719 | prob.delet. | N | 0.500571489 | None | None | N |
N/K | 0.4333 | ambiguous | 0.3939 | ambiguous | -0.088 | Destabilizing | 0.001 | N | 0.278 | neutral | N | 0.51133191 | None | None | N |
N/L | 0.236 | likely_benign | 0.2084 | benign | -0.165 | Destabilizing | 0.048 | N | 0.627 | neutral | None | None | None | None | N |
N/M | 0.3534 | ambiguous | 0.3102 | benign | 0.234 | Stabilizing | 0.465 | N | 0.714 | prob.delet. | None | None | None | None | N |
N/P | 0.7356 | likely_pathogenic | 0.6819 | pathogenic | -0.434 | Destabilizing | 0.051 | N | 0.663 | neutral | None | None | None | None | N |
N/Q | 0.3275 | likely_benign | 0.3095 | benign | -0.777 | Destabilizing | None | N | 0.334 | neutral | None | None | None | None | N |
N/R | 0.4311 | ambiguous | 0.3917 | ambiguous | -0.104 | Destabilizing | 0.063 | N | 0.472 | neutral | None | None | None | None | N |
N/S | 0.068 | likely_benign | 0.0602 | benign | -0.978 | Destabilizing | None | N | 0.283 | neutral | N | 0.4968881 | None | None | N |
N/T | 0.1383 | likely_benign | 0.1328 | benign | -0.627 | Destabilizing | 0.006 | N | 0.458 | neutral | N | 0.485087353 | None | None | N |
N/V | 0.221 | likely_benign | 0.1878 | benign | -0.434 | Destabilizing | 0.01 | N | 0.636 | neutral | None | None | None | None | N |
N/W | 0.734 | likely_pathogenic | 0.6909 | pathogenic | -0.629 | Destabilizing | 0.964 | D | 0.715 | prob.delet. | None | None | None | None | N |
N/Y | 0.152 | likely_benign | 0.145 | benign | -0.413 | Destabilizing | 0.11 | N | 0.707 | prob.neutral | N | 0.500317999 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.